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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • extracellular 1
  • mitochondrion 5
  • vacuole 1
  • plasma membrane 1
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G250900.1 Wheat mitochondrion 93.12 93.12
TraesCS1D01G239000.1 Wheat mitochondrion 91.01 91.01
TraesCS1A01G238800.1 Wheat mitochondrion 90.48 90.48
Zm00001d009985_P001 Maize cytosol, mitochondrion, plastid 75.66 75.66
Zm00001d038061_P001 Maize mitochondrion 78.84 73.04
EES19444 Sorghum plastid 74.6 70.85
Os05t0380900-01 Rice cytosol, mitochondrion 72.49 68.16
HORVU3Hr1G107090.2 Barley cytosol, plastid 68.25 67.54
KRH75577 Soybean cytosol 35.45 44.08
KRH60410 Soybean cytosol, plastid 42.33 42.55
PGSC0003DMT400025178 Potato cytosol 39.15 42.53
Solyc01g005370.2.1 Tomato cytosol 38.62 42.44
PGSC0003DMT400075801 Potato plastid 43.39 42.27
KRH49632 Soybean cytosol, mitochondrion, plastid 40.21 41.76
Solyc04g008000.2.1 Tomato cytosol, plastid 41.8 41.36
HORVU4Hr1G081250.1 Barley cytosol 12.7 39.34
CDY40786 Canola cytosol 38.1 39.13
CDY03874 Canola cytosol 38.1 39.13
Bra032785.1-P Field mustard cytosol 26.45 39.06
AT1G24620.1 Thale cress cytosol 38.1 38.71
Bra012497.1-P Field mustard cytosol 37.57 38.59
HORVU3Hr1G007420.1 Barley cytosol 37.04 37.63
HORVU5Hr1G068490.1 Barley cytosol 16.93 37.21
Bra010974.1-P Field mustard cytosol 36.51 36.9
CDY36129 Canola cytosol 36.51 36.9
CDX84967 Canola cytosol 36.51 36.51
KRH37459 Soybean cytosol 19.58 36.27
CDY27574 Canola cytosol 36.51 36.13
HORVU7Hr1G101640.1 Barley cytosol, plastid 28.57 35.53
HORVU6Hr1G076690.1 Barley cytosol 28.04 35.33
HORVU5Hr1G018360.1 Barley cytosol, plastid 28.04 35.1
HORVU1Hr1G074240.1 Barley cytosol, plastid 27.51 34.67
HORVU0Hr1G031990.1 Barley cytosol, plastid 28.57 34.18
HORVU7Hr1G029640.1 Barley cytosol, plastid 27.51 33.12
HORVU1Hr1G029850.1 Barley cytosol 38.1 31.58
HORVU6Hr1G034200.1 Barley cytosol, plastid 26.45 31.45
HORVU1Hr1G023720.1 Barley cytosol, plastid 26.45 31.25
HORVU4Hr1G085560.1 Barley cytosol, plastid 29.1 31.07
HORVU4Hr1G032570.1 Barley cytosol, plastid 24.34 30.67
HORVU5Hr1G043460.1 Barley plastid 29.1 30.05
HORVU7Hr1G008910.2 Barley cytosol 33.86 29.91
HORVU5Hr1G085800.2 Barley cytosol 26.98 29.14
HORVU5Hr1G117570.1 Barley cytosol 19.58 28.46
HORVU7Hr1G072770.1 Barley plastid 29.63 28.28
HORVU5Hr1G077930.1 Barley cytosol 21.69 27.52
HORVU4Hr1G050990.1 Barley plastid 28.04 27.46
HORVU7Hr1G027770.3 Barley endoplasmic reticulum 32.8 27.07
CDY24421 Canola endoplasmic reticulum, golgi 35.98 25.09
HORVU5Hr1G073590.1 Barley cytosol, plastid 20.11 20.88
HORVU3Hr1G106950.3 Barley cytosol 25.4 17.78
Protein Annotations
EnsemblPlants:HORVU1Hr1G057410.1EnsemblPlantsGene:HORVU1Hr1G057410Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488GO:GO:0005509
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR10891PANTHER:PTHR10891:SF635
PFAM:PF13499PFscan:PS50222ScanProsite:PS00018SEG:segSMART:SM00054SUPFAM:SSF47473
UniParc:UPI0001817FECUniProt:M0YIV4MapMan:35.1:::
Description
No Description!
Coordinates
chrchr1H:-:419337464..419339152
Molecular Weight (calculated)
20093.4 Da
IEP (calculated)
4.823
GRAVY (calculated)
-0.359
Length
189 amino acids
Sequence
(BLAST)
001: MGKMRSLFSR SRSGNGGSRR STSSSRSSAP PSPARGASRE DEMERVFRKF DANGDGRISR AELAALFESV GHAVTDDEVA RMMEEADADG DGYISLAEFA
101: AINAAPDAAV EEDLRHAFRV FDADGNGVIS PAELARVLRG LGEAATVAQC RRMIEGVDRN GDGLVSFDEF KLMMANGAGF AIAQGNVRA
Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.