Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G117570.1 | Barley | cytosol | 75.84 | 86.92 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 35.57 | 86.89 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 63.76 | 63.33 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 64.43 | 63.16 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 63.09 | 62.25 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 63.09 | 59.87 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 63.09 | 59.12 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 59.06 | 58.67 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 59.06 | 58.67 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 61.74 | 57.5 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 58.39 | 55.06 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 63.09 | 53.11 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 63.76 | 51.08 |
| TraesCS3D01G041500.1 | Wheat | cytosol | 62.42 | 50.27 |
| TraesCS3A01G038300.1 | Wheat | cytosol | 62.42 | 50.0 |
| TraesCS3B01G045500.1 | Wheat | cytosol | 62.42 | 49.73 |
| Os01t0135700-01 | Rice | plasma membrane | 53.02 | 43.65 |
| TraesCS3D01G041400.1 | Wheat | cytosol, plastid | 61.07 | 38.24 |
| Zm00001d039944_P001 | Maize | cytosol, plastid | 48.99 | 37.44 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 45.64 | 37.36 |
| EES00360 | Sorghum | cytosol | 50.34 | 36.41 |
| Zm00001d008573_P001 | Maize | plastid | 49.66 | 36.1 |
| PGSC0003DMT400014742 | Potato | cytosol | 31.54 | 28.66 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 28.86 | 27.92 |
| Solyc03g118810.1.1 | Tomato | cytosol | 30.2 | 27.44 |
| PGSC0003DMT400074098 | Potato | cytosol | 28.19 | 27.27 |
| KRH41828 | Soybean | cytosol | 30.2 | 25.0 |
| KRH15405 | Soybean | cytosol | 23.49 | 24.31 |
| KRH24162 | Soybean | cytosol | 22.82 | 24.29 |
| Bra015979.1-P | Field mustard | cytosol | 25.5 | 23.9 |
| CDX96488 | Canola | cytosol | 25.5 | 23.9 |
| CDX72996 | Canola | cytosol | 25.5 | 23.9 |
| Bra025924.1-P | Field mustard | cytosol | 26.17 | 23.35 |
| CDY70127 | Canola | cytosol | 26.17 | 23.35 |
| AT1G73630.1 | Thale cress | cytosol | 25.5 | 23.31 |
| KRH48613 | Soybean | cytosol | 27.52 | 22.91 |
| CDY19196 | Canola | cytosol | 26.17 | 22.03 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 28.19 | 21.99 |
| AT1G18210.1 | Thale cress | cytosol | 24.83 | 21.76 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 27.52 | 21.69 |
| CDX83860 | Canola | cytosol | 25.5 | 21.47 |
| HORVU5Hr1G068490.1 | Barley | cytosol | 12.08 | 20.93 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 31.54 | 20.61 |
| KRH02767 | Soybean | cytosol | 20.81 | 20.39 |
| KRH60530 | Soybean | plastid | 29.53 | 20.37 |
| CDX96729 | Canola | cytosol | 22.82 | 19.54 |
| Bra016564.1-P | Field mustard | cytosol | 22.15 | 18.97 |
| HORVU5Hr1G085800.2 | Barley | cytosol | 22.15 | 18.86 |
| HORVU5Hr1G043460.1 | Barley | plastid | 20.81 | 16.94 |
| KRH16247 | Soybean | cytosol | 14.77 | 16.79 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 23.49 | 16.36 |
| HORVU7Hr1G072770.1 | Barley | plastid | 18.79 | 14.14 |
| HORVU4Hr1G050990.1 | Barley | plastid | 18.12 | 13.99 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 21.48 | 13.97 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 15.44 | 8.52 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G077930.1 | EnsemblPlantsGene:HORVU5Hr1G077930 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF676 |
| PFAM:PF13202 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000B47B764 | UniProt:A0A287RWQ6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:554257525..554258065
Molecular Weight (calculated)
15895.0 Da
IEP (calculated)
4.451
GRAVY (calculated)
-0.770
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: VPGARAAHNP EGPEHQRRSR RGRGGGGGEG EEDGFETDGD GRISPSELAA VSRAIAPPAT ESAGGREVAS MMDELDTDRD GFVDLGEFAA FHGHGRGERE
101: LDAELRDSFD VDDINGDGRI SDTELSKVVL LFSYYAHTGY PKKTAIYGT
101: LDAELRDSFD VDDINGDGRI SDTELSKVVL LFSYYAHTGY PKKTAIYGT
001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
Arabidopsis Description
CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.