Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G132700.1 | Wheat | endoplasmic reticulum | 85.59 | 84.85 |
| TraesCS7B01G034000.1 | Wheat | endoplasmic reticulum | 83.84 | 82.05 |
| Os06t0172200-02 | Rice | plasma membrane | 69.87 | 67.8 |
| Zm00001d037477_P001 | Maize | endoplasmic reticulum, vacuole | 67.69 | 63.79 |
| EER87935 | Sorghum | endoplasmic reticulum, vacuole | 65.07 | 60.82 |
| TraesCS7A01G133200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 85.59 | 57.99 |
| GSMUA_Achr6P35120_001 | Banana | endoplasmic reticulum | 41.05 | 43.32 |
| PGSC0003DMT400086334 | Potato | cytosol | 28.82 | 37.29 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 9.61 | 36.07 |
| HORVU5Hr1G068490.1 | Barley | cytosol | 13.54 | 36.05 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 33.62 | 34.68 |
| KRH20147 | Soybean | extracellular | 34.06 | 34.06 |
| KRH03663 | Soybean | endoplasmic reticulum, extracellular | 34.06 | 34.06 |
| PGSC0003DMT400079359 | Potato | extracellular, golgi | 33.62 | 32.91 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 27.07 | 32.8 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 27.07 | 32.46 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 35.37 | 31.64 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 28.82 | 30.84 |
| HORVU5Hr1G085800.2 | Barley | cytosol | 23.14 | 30.29 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 24.02 | 29.57 |
| HORVU4Hr1G050990.1 | Barley | plastid | 24.02 | 28.5 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 17.03 | 26.0 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 25.33 | 25.44 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 16.59 | 25.33 |
| HORVU7Hr1G072770.1 | Barley | plastid | 21.83 | 25.25 |
| HORVU5Hr1G043460.1 | Barley | plastid | 19.65 | 24.59 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 16.16 | 24.34 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 16.59 | 23.9 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 15.72 | 23.84 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 16.16 | 23.57 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 16.16 | 23.42 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 16.16 | 23.12 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 14.85 | 22.67 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 17.47 | 22.6 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 12.23 | 21.54 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 13.97 | 21.48 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 19.65 | 16.67 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 10.48 | 13.19 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G027770.3 | EnsemblPlantsGene:HORVU7Hr1G027770 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF703 |
| PFAM:PF13202 | PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000B471713 | UniProt:A0A287VU64 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr7H:-:49731560..49732918
Molecular Weight (calculated)
22412.5 Da
IEP (calculated)
4.249
GRAVY (calculated)
-0.191
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLLLLFLL GGLCALFSLA SSSRGAKKCC DGGEQEKKAS KVEEGGKAGK AVEEARPAPA DREADLGIVF STFDHDGDXX XXXXXXXXXX XXXXIAVSAA
101: EAAAMVARVD ANSDGLIDIH EFRELYDSIP KKRKASLLPP SAGAGAGAGE EEEDEEGEEM DLKEAFDVFD GNKDGLISAE ELGTVLGSLG LRGRPAAAEC
201: RDMIRLVDSD GDGMVNFEEF KRMMAVVKA
101: EAAAMVARVD ANSDGLIDIH EFRELYDSIP KKRKASLLPP SAGAGAGAGE EEEDEEGEEM DLKEAFDVFD GNKDGLISAE ELGTVLGSLG LRGRPAAAEC
201: RDMIRLVDSD GDGMVNFEEF KRMMAVVKA
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.