Factsheet for Solyc07g007950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079359	Potato	extracellular, golgi	95.5	90.6
Solyc06g083000.1.1	Tomato	cytosol	35.14	52.35
Solyc05g050750.1.1	Tomato	cytosol, unclear	35.14	52.0
VIT_11s0016g05740.t01	Wine grape	extracellular, golgi	57.66	50.0
Solyc09g055880.1.1	Tomato	cytosol	31.98	47.33
KRH03663	Soybean	endoplasmic reticulum, extracellular	48.65	47.16
KRH20147	Soybean	extracellular	47.75	46.29
Solyc11g044920.1.1	Tomato	cytosol	24.32	44.63
Solyc01g005370.2.1	Tomato	cytosol	32.43	41.86
Solyc02g063350.1.1	Tomato	cytosol	26.58	40.69
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	27.48	39.61
TraesCS7D01G132700.1	Wheat	endoplasmic reticulum	39.19	37.66
TraesCS7B01G034000.1	Wheat	endoplasmic reticulum	38.74	36.75
Solyc04g008000.2.1	Tomato	cytosol, plastid	31.53	36.65
Solyc02g091500.1.1	Tomato	cytosol	25.68	36.54
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	35.59	36.41
Os06t0172200-02	Rice	plasma membrane	37.84	35.59
Solyc03g118810.1.1	Tomato	cytosol	26.13	35.37
HORVU7Hr1G027770.3	Barley	endoplasmic reticulum	34.68	33.62
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	36.04	32.92
EER87935	Sorghum	endoplasmic reticulum, vacuole	36.04	32.65
Solyc02g065000.1.1	Tomato	cytosol	25.23	32.37
Solyc01g108190.2.1	Tomato	plastid	26.13	31.35
Solyc10g074740.1.1	Tomato	cytosol, plastid	26.58	29.65
Solyc10g079420.1.1	Tomato	nucleus, plastid	23.87	25.85
TraesCS7A01G133200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	39.19	25.74
Solyc04g018110.1.1	Tomato	plastid	23.87	21.9

Protein Annotations

EnsemblPlants:Solyc07g007950.1.1	EnsemblPlantsGene:Solyc07g007950.1	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF703
PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	TMHMM:TMhelix	UniParc:UPI000276B007	UniProt:K4CBR4	MapMan:35.1	:

Description

No Description!

Coordinates

chr7:+:2646086..2646754

Molecular Weight (calculated)

25189.2 Da

IEP (calculated)

4.222

GRAVY (calculated)

-0.162

Length

222 amino acids

Sequence
(BLAST)

001: MLTISLLFLA FLFILGLITT LFNFPTKKFQ SWIFSLSVKP QTLTPTTPFV NKDSIFVEKK SSKVELSGVF ATFDKNNDGY ITKQELKQSL KNIGIFMEDG
101: DILEMVEKVD FNKDGLIDID EFYELCHSFL GIEKVVSEEE EEGGVEEGDL KDAFDVFDYD KDGLISEEEL SKVLSSLGLN QGKRLDDCKE MIRNVDVDGD
201: GMVNFDEFKK MMRNGGRLIP IP

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.