Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
- endoplasmic reticulum 2
- plasma membrane 2
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400027581 | Potato | cytosol, plastid | 83.06 | 93.06 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 54.55 | 64.39 |
| Bra016936.1-P | Field mustard | cytosol | 24.38 | 56.19 |
| VIT_08s0007g05790.t01 | Wine grape | mitochondrion, plastid | 51.24 | 55.86 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 41.74 | 47.42 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 42.15 | 47.0 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 41.74 | 46.54 |
| Bra004620.1-P | Field mustard | cytosol, mitochondrion, plastid | 40.91 | 46.48 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 40.91 | 46.48 |
| KRH66816 | Soybean | plastid | 41.74 | 46.12 |
| KRG95139 | Soybean | plastid | 41.32 | 45.87 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 40.08 | 44.91 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 37.6 | 43.54 |
| TraesCS5B01G134200.1 | Wheat | cytosol | 16.12 | 43.33 |
| Bra029821.1-P | Field mustard | plastid | 36.36 | 42.31 |
| CDY60169 | Canola | cytosol, plastid | 35.95 | 41.83 |
| CDY00910 | Canola | cytosol, plastid | 37.19 | 41.28 |
| GSMUA_Achr8P09680_001 | Banana | plastid | 33.06 | 39.6 |
| Solyc06g083000.1.1 | Tomato | cytosol | 23.55 | 38.26 |
| Solyc02g091500.1.1 | Tomato | cytosol | 24.38 | 37.82 |
| Solyc09g055880.1.1 | Tomato | cytosol | 23.14 | 37.33 |
| Solyc02g063350.1.1 | Tomato | cytosol | 22.31 | 37.24 |
| Zm00001d004972_P001 | Maize | plastid | 28.51 | 36.9 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 22.31 | 36.0 |
| EES02048 | Sorghum | plastid | 28.1 | 35.6 |
| TraesCS5D01G141900.1 | Wheat | plastid | 26.86 | 35.52 |
| HORVU5Hr1G043460.1 | Barley | plastid | 26.86 | 35.52 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 22.31 | 35.06 |
| TraesCS3A01G488700.1 | Wheat | nucleus, plastid | 27.69 | 34.9 |
| Zm00001d042108_P001 | Maize | cytosol, plastid | 27.69 | 34.9 |
| TraesCS3D01G484600.1 | Wheat | cytosol, plastid | 27.69 | 34.36 |
| Os11t0141400-01 | Rice | cytosol | 26.45 | 34.04 |
| TraesCS3B01G536600.1 | Wheat | nucleus, plastid | 27.69 | 34.01 |
| KXG27695 | Sorghum | plastid | 27.27 | 33.5 |
| Solyc01g005370.2.1 | Tomato | cytosol | 23.55 | 33.14 |
| EES16521 | Sorghum | plastid | 28.93 | 32.71 |
| Os01t0949300-01 | Rice | plasma membrane | 26.86 | 31.86 |
| Solyc03g118810.1.1 | Tomato | cytosol | 21.49 | 31.71 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 24.38 | 30.89 |
| Solyc11g044920.1.1 | Tomato | cytosol | 15.29 | 30.58 |
| Solyc02g065000.1.1 | Tomato | cytosol | 21.49 | 30.06 |
| Solyc01g108190.2.1 | Tomato | plastid | 22.73 | 29.73 |
| GSMUA_Achr8P00110_001 | Banana | endoplasmic reticulum, golgi | 35.12 | 29.51 |
| Os12t0138050-00 | Rice | plastid | 27.69 | 28.15 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 27.69 | 24.81 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 21.9 | 23.87 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 19.42 | 23.62 |
Protein Annotations
| EnsemblPlants:Solyc04g018110.1.1 | EnsemblPlantsGene:Solyc04g018110.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF739 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00027655E6 | UniProt:K4BQL0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4:+:9603164..9603892
Molecular Weight (calculated)
26746.0 Da
IEP (calculated)
4.222
GRAVY (calculated)
-0.378
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYLNLLHF FFLSTSFINS YSFSKFSTMK FPKNFFKSKK SRSLSRSDDP SYSSSSSSSN KGGSVGGIST PTSVLPTLSN EISADEWSDI STAGVYSDLV
101: RAFSVIDNGD GKIKKEKLEA ILSRVGGKSP PSEEELVLLL DELDENGDGC ISLENFETIT SAFESTPTSA AGDAGEMRDA FDFFDEDHDG KITGEELFNV
201: FRMIGDERCT LEECKRMITS VDKNGDGFVC FDDFCLMMEQ QR
101: RAFSVIDNGD GKIKKEKLEA ILSRVGGKSP PSEEELVLLL DELDENGDGC ISLENFETIT SAFESTPTSA AGDAGEMRDA FDFFDEDHDG KITGEELFNV
201: FRMIGDERCT LEECKRMITS VDKNGDGFVC FDDFCLMMEQ QR
001: MKLAASLNRL SPKRLFRTKS KASVSRSEPS SFSSNASSSS SDGSYGNLKQ GPTATPISVL PQNSGDFYTE LVQAFKLIDR DDDGVVSRGD LAALISRLSH
101: EPPSQEEVSL MLREVDGGDG GCISLEDLAS RVAGTSGEGS VETEELREVF EIFDVDRNGK ISAEELHRVF GVIGDERCTL EECMRMIATV DGNGDGFVCF
201: DDFCRMMVPA MNDHHH
101: EPPSQEEVSL MLREVDGGDG GCISLEDLAS RVAGTSGEGS VETEELREVF EIFDVDRNGK ISAEELHRVF GVIGDERCTL EECMRMIATV DGNGDGFVCF
201: DDFCRMMVPA MNDHHH
Arabidopsis Description
CML35Probable calcium-binding protein CML35 [Source:UniProtKB/Swiss-Prot;Acc:P30188]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.