Factsheet for GSMUA_Achr8P09680_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P25160_001
GSMUA_Achr4P08560_001
GSMUA_Achr7P24480_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41410.1	GSMUA_Achr10P...	AT2G42580.1	19000166
AT2G41410.1	GSMUA_Achr3P25160_001	AT2G42580.1	19000166
AT2G41410.1	GSMUA_Achr4P08560_001	AT2G42580.1	19000166
AT2G41410.1	GSMUA_Achr7P24480_001	AT2G42580.1	19000166
AT2G41410.1	GSMUA_AchrUn_...	AT2G42580.1	19000166
AT2G41410.1	GSMUA_AchrUn_...	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016936.1-P	Field mustard	cytosol	26.24	50.48
TraesCS3A01G488700.1	Wheat	nucleus, plastid	43.56	45.83
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	65.35	45.83
TraesCS3B01G536600.1	Wheat	nucleus, plastid	44.55	45.69
TraesCS3D01G484600.1	Wheat	cytosol, plastid	43.56	45.13
Os01t0949300-01	Rice	plasma membrane	44.06	43.63
Zm00001d042108_P001	Maize	cytosol, plastid	40.1	42.19
EES02048	Sorghum	plastid	39.6	41.88
AT3G10190.1	Thale cress	cytosol, mitochondrion	43.07	41.63
CDY23852	Canola	cytosol, mitochondrion, plastid	43.56	41.31
KRG95139	Soybean	plastid	44.55	41.28
KRH66816	Soybean	plastid	44.55	41.1
CDX79938	Canola	cytosol, mitochondrion, plastid	43.07	40.85
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	43.07	40.85
Solyc10g079420.1.1	Tomato	nucleus, plastid	40.59	40.0
GSMUA_Achr8P28890_001	Banana	cytosol	29.7	40.0
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	43.56	39.64
CDY06925	Canola	cytosol, mitochondrion, plastid	42.57	39.63
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	40.1	39.51
PGSC0003DMT400076709	Potato	mitochondrion	41.09	39.34
Bra029821.1-P	Field mustard	plastid	40.1	38.94
CDY14768	Canola	cytosol, mitochondrion, plastid	41.58	38.71
GSMUA_Achr1P13420_001	Banana	cytosol	28.71	38.67
CDY60169	Canola	cytosol, plastid	39.6	38.46
GSMUA_Achr3P16870_001	Banana	cytosol	28.71	38.41
GSMUA_Achr6P28770_001	Banana	cytosol	28.22	38.0
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	33.17	37.85
GSMUA_Achr2P05840_001	Banana	cytosol	27.72	37.33
CDY00910	Canola	cytosol, plastid	40.1	37.16
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	39.6	37.04
PGSC0003DMT400027581	Potato	cytosol, plastid	38.12	35.65
GSMUA_Achr11P...	Banana	cytosol, plastid	28.71	33.72
Solyc04g018110.1.1	Tomato	plastid	39.6	33.06
HORVU3Hr1G106950.3	Barley	cytosol	43.56	32.59
GSMUA_Achr8P01570_001	Banana	cytosol	27.72	30.27
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	32.18	29.95
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	32.67	29.86
GSMUA_Achr9P27060_001	Banana	plastid	26.73	27.41
GSMUA_Achr6P09820_001	Banana	cytosol	32.18	24.9

Protein Annotations

EnsemblPlants:GSMUA_Achr8P09680_001	EnsemblPlants:GSMUA_Achr8T09680_001	EnsemblPlantsGene:GSMUA_Achr8G09680_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF739	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI00029492F6	UniProt:M0TP21	MapMan:35.1	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G09680_001]

Coordinates

chr8:+:6807567..6808303

Molecular Weight (calculated)

21334.8 Da

IEP (calculated)

4.214

GRAVY (calculated)

-0.190

Length

202 amino acids

Sequence
(BLAST)

001: MKLSVASFFG SNSKKADKKK SKNRRDSSFG NNASTSSSSD ESSTSSSLLH ASPRSVLPFS VHDLFGVLDR DGDGKIVVRE LEAVLRRLGP DPLTAEEAAS
101: VAAEVGLAGD GCITVEELEA LGAKLQLPAA AEAEAELREA FAVFDADGDG RISAEELLGV FVTLGDDGCT LEDCRCMIQG VDTDGDGFVC FDDFARMMDG
201: QR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.