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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G41410.1 TraesCS1A01G427400.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS1B01G462300.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS1D01G437100.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3A01G143000.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3A01G221800.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3B01G162100.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3B01G251600.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3D01G144600.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3D01G231300.1 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G488700.1 Wheat nucleus, plastid 94.92 97.4
TraesCS3D01G484600.1 Wheat cytosol, plastid 94.42 95.38
Os01t0949300-01 Rice plasma membrane 78.68 75.98
EES02048 Sorghum plastid 67.51 69.63
Zm00001d042108_P001 Maize cytosol, plastid 65.99 67.71
HORVU3Hr1G106950.3 Barley cytosol 91.88 67.04
TraesCS5B01G134200.1 Wheat cytosol 23.35 51.11
GSMUA_Achr8P09680_001 Banana plastid 45.69 44.55
KRH66816 Soybean plastid 39.09 35.16
KRG95139 Soybean plastid 38.58 34.86
CDY23852 Canola cytosol, mitochondrion, plastid 37.56 34.74
PGSC0003DMT400076709 Potato mitochondrion 37.06 34.6
Bra016936.1-P Field mustard cytosol 18.27 34.29
CDX79938 Canola cytosol, mitochondrion, plastid 37.06 34.27
Bra004620.1-P Field mustard cytosol, mitochondrion, plastid 37.06 34.27
PGSC0003DMT400021079 Potato cytosol, mitochondrion, plastid 35.03 33.66
Solyc10g079420.1.1 Tomato nucleus, plastid 35.03 33.66
CDY06925 Canola cytosol, mitochondrion, plastid 37.06 33.64
AT3G10190.1 Thale cress cytosol, mitochondrion 35.53 33.49
VIT_08s0007g05790.t01 Wine grape mitochondrion, plastid 37.56 33.33
CDY14768 Canola cytosol, mitochondrion, plastid 36.55 33.18
AT2G41410.1 Thale cress cytosol, mitochondrion, plastid 35.53 32.41
CDY60169 Canola cytosol, plastid 33.5 31.73
Bra029821.1-P Field mustard plastid 32.99 31.25
CDY00910 Canola cytosol, plastid 33.5 30.28
PGSC0003DMT400027581 Potato cytosol, plastid 32.49 29.63
Solyc04g018110.1.1 Tomato plastid 34.01 27.69
TraesCS3B01G536200.1 Wheat cytosol, plastid 25.89 26.84
TraesCS3B01G538300.1 Wheat cytosol, plastid 25.89 26.84
TraesCS5B01G237500.1 Wheat mitochondrion 24.37 26.23
TraesCS1B01G148000.1 Wheat cytosol 22.84 26.16
TraesCS2B01G367500.1 Wheat plastid 27.92 25.7
TraesCS1B01G250900.1 Wheat mitochondrion 24.37 25.4
TraesCS5B01G342800.1 Wheat cytosol 20.3 24.69
TraesCS3B01G045500.1 Wheat cytosol 23.35 24.6
TraesCS2B01G120900.1 Wheat plastid 22.84 23.56
TraesCS4B01G172400.1 Wheat plastid 22.34 23.28
TraesCS7B01G034000.1 Wheat endoplasmic reticulum 27.41 23.08
TraesCS7B01G206200.1 Wheat plastid 21.83 21.72
Protein Annotations
EnsemblPlants:TraesCS3B01G536600.1EnsemblPlantsGene:TraesCS3B01G536600Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488GO:GO:0005509
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR10891PANTHER:PTHR10891:SF739
PFAM:PF13499PFscan:PS50222ScanProsite:PS00018SEG:segSMART:SM00054SUPFAM:SSF47473
TIGR:cd00051MapMan:35.2::::
Description
No Description!
Coordinates
chr3B:-:776534286..776534879
Molecular Weight (calculated)
20534.0 Da
IEP (calculated)
4.469
GRAVY (calculated)
-0.368
Length
197 amino acids
Sequence
(BLAST)
001: MKLSMQSLAR KLSIPSPKRG KKQQQQDGGG SGSGKRGISR SEAPSFASAS SSSTSSSTED ALPRASTPRS VLPAEISRRE LEAVLRRLGH EEPSDDELDA
101: VAAIAAAGEA GPEDELMEAF NVFDADGDGR ITAEELRGVM VAILGGEADG CSLDDCRRMI GGVDADGDGF VGFQDFARMM MVSTTAAATT SAGPRFM
Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.