Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G093390.2 | |
| HORVU3Hr1G027650.2 | |
| HORVU3Hr1G054240.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G41410.1 | HORVU1Hr1G093390.2 | AT2G42580.1 | 19000166 |
| AT2G41410.1 | HORVU3Hr1G027650.2 | AT2G42580.1 | 19000166 |
| AT2G41410.1 | HORVU3Hr1G054240.2 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G488700.1 | Wheat | nucleus, plastid | 66.3 | 93.23 |
| TraesCS3D01G484600.1 | Wheat | cytosol, plastid | 67.04 | 92.82 |
| TraesCS3B01G536600.1 | Wheat | nucleus, plastid | 67.04 | 91.88 |
| Os01t0949300-01 | Rice | plasma membrane | 56.67 | 75.0 |
| EES02048 | Sorghum | plastid | 49.26 | 69.63 |
| Zm00001d042108_P001 | Maize | cytosol, plastid | 47.41 | 66.67 |
| GSMUA_Achr8P09680_001 | Banana | plastid | 32.59 | 43.56 |
| HORVU5Hr1G043460.1 | Barley | plastid | 27.78 | 40.98 |
| HORVU5Hr1G068490.1 | Barley | cytosol | 11.48 | 36.05 |
| PGSC0003DMT400076709 | Potato | mitochondrion | 27.41 | 35.07 |
| Bra016936.1-P | Field mustard | cytosol | 13.33 | 34.29 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 27.04 | 34.27 |
| KRH66816 | Soybean | plastid | 27.78 | 34.25 |
| KRG95139 | Soybean | plastid | 27.41 | 33.95 |
| Bra004620.1-P | Field mustard | cytosol, mitochondrion, plastid | 26.67 | 33.8 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 26.67 | 33.8 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 25.56 | 33.66 |
| PGSC0003DMT400021079 | Potato | cytosol, mitochondrion, plastid | 25.56 | 33.66 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 25.93 | 33.49 |
| VIT_08s0007g05790.t01 | Wine grape | mitochondrion, plastid | 27.41 | 33.33 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 26.67 | 33.18 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 26.3 | 32.72 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 25.56 | 31.94 |
| CDY60169 | Canola | cytosol, plastid | 24.44 | 31.73 |
| Bra029821.1-P | Field mustard | plastid | 24.07 | 31.25 |
| CDY00910 | Canola | cytosol, plastid | 24.44 | 30.28 |
| PGSC0003DMT400027581 | Potato | cytosol, plastid | 23.7 | 29.63 |
| Solyc04g018110.1.1 | Tomato | plastid | 24.81 | 27.69 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 18.89 | 26.7 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 17.78 | 25.4 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 16.3 | 23.66 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 5.19 | 22.95 |
| HORVU5Hr1G085800.2 | Barley | cytosol | 14.81 | 22.86 |
| HORVU4Hr1G050990.1 | Barley | plastid | 15.93 | 22.28 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 17.41 | 21.96 |
| HORVU7Hr1G072770.1 | Barley | plastid | 15.93 | 21.72 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 16.67 | 19.74 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 16.67 | 19.65 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 10.74 | 19.33 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 10.74 | 19.21 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 10.37 | 18.42 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 10.74 | 18.35 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 10.74 | 18.24 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 10.0 | 17.2 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 11.11 | 16.95 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 10.0 | 16.88 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 8.89 | 16.0 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 8.52 | 15.44 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 7.41 | 15.38 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 8.52 | 15.33 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 7.41 | 10.99 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G106950.3 | EnsemblPlantsGene:HORVU3Hr1G106950 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF739 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000B460F5B | UniProt:A0A287MKW4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:672007331..672008855
Molecular Weight (calculated)
29148.5 Da
IEP (calculated)
10.339
GRAVY (calculated)
-0.632
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSTTNQAYR TRARRLKNRK PRQGGSFREA HSRPRPPPIY RRLPPPPPPT PHISINPSLR PSFPPPPAAF VSFPSRKRKM KLSMQSLARK LSIPSPKRGK
101: KQQQQEESGK RGISRSEAPS FASASSSSTA SSSASEDAPA RASTPRSVLP AEISRRELEA VLRRLGHEEP SDDELDAVAA IAAAGEAGPE DELMEAFNVF
201: DADGDGRITA EELRGVMVAI LGGEADGCSL DDCRRMIGGV DADGDGFVGF QDFARMMMVS TTAAAGPRFL
101: KQQQQEESGK RGISRSEAPS FASASSSSTA SSSASEDAPA RASTPRSVLP AEISRRELEA VLRRLGHEEP SDDELDAVAA IAAAGEAGPE DELMEAFNVF
201: DADGDGRITA EELRGVMVAI LGGEADGCSL DDCRRMIGGV DADGDGFVGF QDFARMMMVS TTAAAGPRFL
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.