CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60169	Canola	cytosol, plastid	92.2	96.63
AT3G10190.1	Thale cress	cytosol, mitochondrion	75.23	78.47
KRG95139	Soybean	plastid	52.29	52.29
CDX79938	Canola	cytosol, mitochondrion, plastid	50.92	52.11
CDY23852	Canola	cytosol, mitochondrion, plastid	50.92	52.11
KRH66816	Soybean	plastid	52.29	52.05
CDY06925	Canola	cytosol, mitochondrion, plastid	50.46	50.69
CDY14768	Canola	cytosol, mitochondrion, plastid	50.46	50.69
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	50.92	50.0
TraesCS5B01G134200.1	Wheat	cytosol	20.64	50.0
Solyc10g079420.1.1	Tomato	nucleus, plastid	45.41	48.29
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	44.95	47.8
PGSC0003DMT400076709	Potato	mitochondrion	42.2	43.6
PGSC0003DMT400027581	Potato	cytosol, plastid	41.74	42.13
GSMUA_Achr8P09680_001	Banana	plastid	37.16	40.1
Os11t0141400-01	Rice	cytosol	34.4	39.89
TraesCS5D01G141900.1	Wheat	plastid	32.57	38.8
HORVU5Hr1G043460.1	Barley	plastid	32.57	38.8
Solyc04g018110.1.1	Tomato	plastid	41.28	37.19
EES16521	Sorghum	plastid	34.86	35.51
Zm00001d004972_P001	Maize	plastid	30.28	35.29
KXG27695	Sorghum	plastid	31.19	34.52
TraesCS3A01G488700.1	Wheat	nucleus, plastid	30.28	34.38
CDY70127	Canola	cytosol	26.15	34.13
CDX96150	Canola	cytosol	23.85	33.99
TraesCS3D01G484600.1	Wheat	cytosol, plastid	30.28	33.85
CDX99691	Canola	cytosol	24.31	33.54
TraesCS3B01G536600.1	Wheat	nucleus, plastid	30.28	33.5
CDY27652	Canola	cytosol	24.31	33.33
Zm00001d042108_P001	Maize	cytosol, plastid	29.36	33.33
CDY55679	Canola	cytosol	23.39	33.33
Os01t0949300-01	Rice	plasma membrane	31.19	33.33
CDX96729	Canola	cytosol	26.61	33.33
CDX96488	Canola	cytosol	24.31	33.33
CDX72996	Canola	cytosol	24.31	33.33
CDX90890	Canola	cytosol	23.39	33.12
EES02048	Sorghum	plastid	28.9	32.98
CDY21953	Canola	cytosol	22.94	32.89
CDY60818	Canola	cytosol	22.48	32.89
Os12t0138050-00	Rice	plastid	35.32	32.35
CDY22119	Canola	cytosol	22.48	32.24
CDY19196	Canola	cytosol	25.69	31.64
CDX83860	Canola	cytosol	25.69	31.64
CDY33702	Canola	cytosol	21.56	30.92
CDY39714	Canola	cytosol	21.56	30.92
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	40.37	30.56
CDY63788	Canola	cytosol	21.1	30.46
CDX86544	Canola	cytosol	21.1	30.46
CDY40786	Canola	cytosol	25.69	30.43
CDY03874	Canola	cytosol	25.69	30.43
CDY37233	Canola	plastid	26.15	30.16
CDY66855	Canola	plastid	26.15	30.16
CDX84967	Canola	cytosol	26.15	30.16
CDY27574	Canola	cytosol	26.15	29.84
CDX74043	Canola	cytosol	20.64	29.41
CDY07993	Canola	cytosol	20.64	29.41
CDY36129	Canola	cytosol	25.23	29.41
CDY17950	Canola	cytosol	22.02	28.92
CDX94789	Canola	cytosol	22.94	27.47
CDY49013	Canola	cytosol	22.94	27.47
CDY14927	Canola	cytosol	22.94	27.47
CDX96968	Canola	cytosol	22.94	25.91
CDX94006	Canola	cytosol	21.1	24.73
HORVU3Hr1G106950.3	Barley	cytosol	30.28	24.44
CDX82773	Canola	cytosol	21.1	24.08
CDX79002	Canola	cytosol	20.64	23.94
CDY30399	Canola	extracellular	22.94	23.81
CDY23356	Canola	vacuole	22.94	23.7
CDX67796	Canola	vacuole	22.02	23.65
CDX98375	Canola	endoplasmic reticulum	22.02	23.53
CDY31433	Canola	cytosol, plastid	19.72	23.37
CDX76451	Canola	cytosol, plastid	19.72	23.37
CDX83488	Canola	extracellular	22.94	23.36
CDY06002	Canola	extracellular, vacuole	21.1	23.23
CDY72611	Canola	extracellular, vacuole	21.1	23.0
CDY24421	Canola	endoplasmic reticulum, golgi	25.23	20.3
CDX98672	Canola	cytosol	20.64	17.72
CDY44217	Canola	endoplasmic reticulum, golgi	22.02	17.02

Protein Annotations

EnsemblPlants:CDY00910	EnsemblPlantsGene:GSBRNA2T00110906001	Gene3D:1.10.238.10	GO:A0A078EFQ2	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF739	PFAM:PF13499	PFscan:PS50222	ProteinID:CDY00910	ProteinID:CDY00910.1	ScanProsite:PS00018
SEG:seg	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EDB894	MapMan:35.1	:

Description

BnaC05g42900D

Coordinates

chrLK031923:+:71314..71970

Molecular Weight (calculated)

23824.6 Da

IEP (calculated)

4.279

GRAVY (calculated)

-0.427

Length

218 amino acids

Sequence
(BLAST)

001: MKFAKLNPKR LFRSKDRATV SKSTASSGSA SSFSSGAADE CNNHSSAVTG GSVTPTSILP EVSAVHSPYS YVEILQAFKL IDRDNDGAVS RHDLESLLTR
101: LGPDPPTEEE IDVMLKEVDC DGDGTIRLEE LASRCVVVSS EDDNKSRGGS DELKETFEFF DADRDGKISA EELLRVFSAI GDERCTLEEC ERMIAAVDDD
201: GNGFVCFAEF SRMMDLQR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.