Factsheet for GSMUA_Achr8P00110_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 2
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P25160_001
GSMUA_Achr4P08560_001
GSMUA_Achr7P24480_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41410.1	GSMUA_Achr10P...	AT2G42580.1	19000166
AT2G41410.1	GSMUA_Achr3P25160_001	AT2G42580.1	19000166
AT2G41410.1	GSMUA_Achr4P08560_001	AT2G42580.1	19000166
AT2G41410.1	GSMUA_Achr7P24480_001	AT2G42580.1	19000166
AT2G41410.1	GSMUA_AchrUn_...	AT2G42580.1	19000166
AT2G41410.1	GSMUA_AchrUn_...	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09680_001	Banana	plastid	45.83	65.35
TraesCS5B01G134200.1	Wheat	cytosol	18.06	57.78
Bra016936.1-P	Field mustard	cytosol	18.4	50.48
Os11t0141400-01	Rice	cytosol	31.94	48.94
TraesCS5D01G141900.1	Wheat	plastid	29.17	45.9
HORVU5Hr1G043460.1	Barley	plastid	29.17	45.9
Zm00001d004972_P001	Maize	plastid	29.51	45.45
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	34.72	45.05
Solyc10g079420.1.1	Tomato	nucleus, plastid	31.25	43.9
KXG27695	Sorghum	plastid	29.86	43.65
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	30.9	43.41
PGSC0003DMT400076709	Potato	mitochondrion	31.6	43.13
GSMUA_Achr3P16870_001	Banana	cytosol	22.57	43.05
GSMUA_Achr8P28890_001	Banana	cytosol	22.22	42.67
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	26.04	42.37
CDY23852	Canola	cytosol, mitochondrion, plastid	31.25	42.25
GSMUA_Achr1P13420_001	Banana	cytosol	21.88	42.0
GSMUA_Achr6P28770_001	Banana	cytosol	21.88	42.0
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	30.9	41.78
CDX79938	Canola	cytosol, mitochondrion, plastid	30.9	41.78
AT3G10190.1	Thale cress	cytosol, mitochondrion	30.21	41.63
EES16521	Sorghum	plastid	30.56	41.12
CDY60169	Canola	cytosol, plastid	29.51	40.87
Bra029821.1-P	Field mustard	plastid	29.51	40.87
KRG95139	Soybean	plastid	30.9	40.83
GSMUA_Achr2P05840_001	Banana	cytosol	21.18	40.67
CDY00910	Canola	cytosol, plastid	30.56	40.37
KRH66816	Soybean	plastid	30.56	40.18
Os12t0138050-00	Rice	plastid	32.99	39.92
CDY06925	Canola	cytosol, mitochondrion, plastid	29.51	39.17
PGSC0003DMT400027581	Potato	cytosol, plastid	28.82	38.43
CDY14768	Canola	cytosol, mitochondrion, plastid	28.82	38.25
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	28.47	37.96
GSMUA_Achr11P...	Banana	cytosol, plastid	22.57	37.79
Solyc04g018110.1.1	Tomato	plastid	29.51	35.12
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	25.0	32.58
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	23.26	30.88
GSMUA_Achr6P09820_001	Banana	cytosol	26.74	29.5
GSMUA_Achr8P01570_001	Banana	cytosol	18.75	29.19
GSMUA_Achr9P27060_001	Banana	plastid	17.36	25.38

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr8G00110_001
EnsemblPlants:GSMUA_Achr8P00110_001	EnsemblPlants:GSMUA_Achr8T00110_001	InterPro:IPR002048	UniProt:M0TLB3	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF739	SMART:SM00054	SUPFAM:SSF47473	TMHMM:TMhelix
UniParc:UPI000294846B	SEG:seg	:	:	:	:

Description

Putative OsCML16 - Calmodulin-related calcium sensor protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G00110_001]

Coordinates

chr8:+:89537..90666

Molecular Weight (calculated)

31253.5 Da

IEP (calculated)

4.673

GRAVY (calculated)

0.017

Length

288 amino acids

Sequence
(BLAST)

001: MRQFQRRNFL EAHCRLPLFS LLIPVLTLSS PLLYPPHPNL SLSLFLLPSS FFLLLLLLLP RLEMKLSVDS FLSSFKKYSA AAKNKKKGRR AIARTDALNA
101: SSSSSSASSY SEEYSTATGL QTTPRSVLQA AHGKTPLFLF PDEVSLLDLF NMFDCDGDGK ITKRELEAVL RRLVPDAPTA EEVASMVAEM DRDGDGCISL
201: DEFAALGPAL AASAGGGESE LREAFAVFDA DGDGKISAEE LLGVFATLGD CGCTLEDCRR MIGGVDADGD GFVGFEDFVR MMDGQIRR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.