Factsheet for GSMUA_Achr3P16870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P28890_001	Banana	cytosol	85.43	86.0
GSMUA_Achr6P28770_001	Banana	cytosol	77.48	78.0
GSMUA_Achr2P05840_001	Banana	cytosol	76.82	77.33
GSMUA_Achr1P13420_001	Banana	cytosol	76.16	76.67
PGSC0003DMT400071189	Potato	cytosol	74.17	75.17
VIT_07s0289g00040.t01	Wine grape	cytosol	76.16	74.68
VIT_07s0141g00300.t01	Wine grape	cytosol	76.16	74.68
CDY60818	Canola	cytosol	73.51	74.5
Bra040379.1-P	Field mustard	cytosol	73.51	74.5
Solyc06g083000.1.1	Tomato	cytosol	73.51	74.5
AT3G07490.1	Thale cress	cytosol	74.83	73.86
Solyc09g055880.1.1	Tomato	cytosol	70.86	71.33
CDY07993	Canola	cytosol	72.19	71.24
Bra001254.1-P	Field mustard	cytosol	72.19	71.24
CDX74043	Canola	cytosol	71.52	70.59
KRH66763	Soybean	cytosol	69.54	69.08
KRG95097	Soybean	cytosol	69.54	69.08
Zm00001d023992_P001	Maize	cytosol	68.21	64.78
OQU78964	Sorghum	cytosol	68.21	62.42
Os12t0228800-01	Rice	cytosol	64.9	58.33
TraesCS7A01G050500.1	Wheat	cytosol	62.91	58.28
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	82.12	56.11
TraesCS7D01G045800.1	Wheat	cytosol	62.91	54.91
TraesCS4A01G436700.1	Wheat	cytosol	62.91	54.6
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	70.2	54.08
TraesCS2B01G367500.1	Wheat	plastid	68.21	48.13
TraesCS2A01G349100.1	Wheat	plastid	66.89	46.98
HORVU7Hr1G008910.2	Barley	cytosol	66.23	46.73
TraesCS2D01G347500.1	Wheat	plastid	67.55	46.36
Zm00001d003197_P001	Maize	plastid	64.24	43.69
EES11048	Sorghum	plastid	65.56	41.6
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	44.37	37.85
GSMUA_Achr11P...	Banana	cytosol, plastid	41.06	36.05
GSMUA_Achr8P01570_001	Banana	cytosol	43.05	35.14
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	50.33	35.02
GSMUA_Achr8P09680_001	Banana	plastid	38.41	28.71
GSMUA_Achr6P09820_001	Banana	cytosol	44.37	25.67
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	43.05	22.57
GSMUA_Achr9P27060_001	Banana	plastid	28.48	21.83

Protein Annotations

EnsemblPlants:GSMUA_Achr3P16870_001	EnsemblPlants:GSMUA_Achr3T16870_001	EnsemblPlantsGene:GSMUA_Achr3G16870_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000295883E	UniProt:M0SFA3	MapMan:35.1	:

Description

Calmodulin-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr3G16870_001]

Coordinates

chr3:-:18089528..18090174

Molecular Weight (calculated)

16982.8 Da

IEP (calculated)

4.041

GRAVY (calculated)

-0.597

Length

151 amino acids

Sequence
(BLAST)

001: MDPSELKPVF HMFDRNGDGR ITKEELSDSL RNLGMRVPEA ELASMIERID ANGDGYVDSD EFATLYRSIM EERDEEEEDM REAFNVFDRN GDGFITVEEL
101: RSVLASLGLK QGRTAEDCKT MINTVDVDGD GMVDFKEFRQ MMNGGGFAAS S

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.