Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001254.1-P | Field mustard | cytosol | 93.46 | 93.46 |
| CDY07993 | Canola | cytosol | 93.46 | 93.46 |
| CDX74043 | Canola | cytosol | 92.81 | 92.81 |
| CDY60818 | Canola | cytosol | 87.58 | 89.93 |
| Bra040379.1-P | Field mustard | cytosol | 87.58 | 89.93 |
| VIT_07s0141g00300.t01 | Wine grape | cytosol | 85.62 | 85.06 |
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 85.62 | 85.06 |
| GSMUA_Achr1P13420_001 | Banana | cytosol | 79.08 | 80.67 |
| GSMUA_Achr2P05840_001 | Banana | cytosol | 78.43 | 80.0 |
| PGSC0003DMT400071189 | Potato | cytosol | 77.78 | 79.87 |
| GSMUA_Achr8P28890_001 | Banana | cytosol | 77.78 | 79.33 |
| Solyc06g083000.1.1 | Tomato | cytosol | 77.12 | 79.19 |
| KRG95097 | Soybean | cytosol | 75.82 | 76.32 |
| Solyc09g055880.1.1 | Tomato | cytosol | 74.51 | 76.0 |
| KRH66763 | Soybean | cytosol | 75.16 | 75.66 |
| GSMUA_Achr3P16870_001 | Banana | cytosol | 73.86 | 74.83 |
| AT1G05990.1 | Thale cress | cytosol | 73.2 | 74.67 |
| AT4G12860.1 | Thale cress | cytosol | 73.2 | 73.68 |
| GSMUA_Achr6P28770_001 | Banana | cytosol | 69.28 | 70.67 |
| Zm00001d023992_P001 | Maize | cytosol | 69.93 | 67.3 |
| AT4G03290.1 | Thale cress | cytosol | 66.67 | 66.23 |
| OQU78964 | Sorghum | cytosol | 70.59 | 65.45 |
| Os12t0228800-01 | Rice | cytosol | 66.01 | 60.12 |
| TraesCS7A01G050500.1 | Wheat | cytosol | 63.4 | 59.51 |
| TraesCS7D01G045800.1 | Wheat | cytosol | 63.4 | 56.07 |
| TraesCS4A01G436700.1 | Wheat | cytosol | 62.75 | 55.17 |
| GSMUA_Achr9P07990_001 | Banana | endoplasmic reticulum, golgi, plastid | 77.12 | 53.39 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 66.67 | 52.31 |
| Os04t0492800-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 66.01 | 51.53 |
| AT2G43290.1 | Thale cress | extracellular | 71.24 | 50.7 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 68.63 | 49.07 |
| TraesCS2B01G367500.1 | Wheat | plastid | 64.05 | 45.79 |
| TraesCS2A01G349100.1 | Wheat | plastid | 63.4 | 45.12 |
| TraesCS2D01G347500.1 | Wheat | plastid | 64.05 | 44.55 |
| Zm00001d003197_P001 | Maize | plastid | 57.52 | 39.64 |
| EES11048 | Sorghum | plastid | 60.13 | 38.66 |
| AT5G37770.1 | Thale cress | cytosol | 40.52 | 38.51 |
| AT1G66400.1 | Thale cress | cytosol | 37.91 | 36.94 |
| AT1G73630.1 | Thale cress | cytosol | 35.95 | 33.74 |
| AT1G24620.1 | Thale cress | cytosol | 39.87 | 32.8 |
| AT4G20780.1 | Thale cress | cytosol | 40.52 | 32.46 |
| AT1G18210.1 | Thale cress | cytosol | 35.95 | 32.35 |
| AT5G44460.1 | Thale cress | cytosol | 37.25 | 31.49 |
| AT2G15680.1 | Thale cress | plastid | 37.25 | 30.48 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 32.03 | 23.45 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 29.41 | 20.83 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:819937 | UniProt:A0A178V7U1 | ProteinID:AAF02168.1 | ProteinID:AEE74549.1 |
| Symbol:AGD11 | ArrayExpress:AT3G07490 | EnsemblPlantsGene:AT3G07490 | RefSeq:AT3G07490 | TAIR:AT3G07490 | RefSeq:AT3G07490-TAIR-G |
| EnsemblPlants:AT3G07490.1 | TAIR:AT3G07490.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_187405.1 | ProteinID:OAP01946.1 | PFAM:PF13499 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01697 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 | UniProt:Q9SRR7 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00000AA6C1 | SEG:seg | : | : | : | : |
Description
CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
Coordinates
chr3:+:2391122..2391908
Molecular Weight (calculated)
17393.7 Da
IEP (calculated)
4.090
GRAVY (calculated)
-0.508
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.