Factsheet for Bra040379.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60818	Canola	cytosol	100.0	100.0
AT3G07490.1	Thale cress	cytosol	89.93	87.58
Bra001254.1-P	Field mustard	cytosol	87.25	84.97
VIT_07s0289g00040.t01	Wine grape	cytosol	80.54	77.92
VIT_07s0141g00300.t01	Wine grape	cytosol	80.54	77.92
PGSC0003DMT400071189	Potato	cytosol	77.85	77.85
GSMUA_Achr2P05840_001	Banana	cytosol	77.85	77.33
GSMUA_Achr1P13420_001	Banana	cytosol	77.18	76.67
Solyc06g083000.1.1	Tomato	cytosol	76.51	76.51
GSMUA_Achr8P28890_001	Banana	cytosol	75.84	75.33
Solyc09g055880.1.1	Tomato	cytosol	74.5	74.0
GSMUA_Achr3P16870_001	Banana	cytosol	74.5	73.51
KRG95097	Soybean	cytosol	74.5	73.03
KRH66763	Soybean	cytosol	73.15	71.71
Bra034907.1-P	Field mustard	cytosol	71.14	69.74
GSMUA_Achr6P28770_001	Banana	cytosol	69.8	69.33
Bra032677.1-P	Field mustard	cytosol	70.47	69.08
Bra000836.1-P	Field mustard	cytosol	69.13	66.88
Zm00001d023992_P001	Maize	cytosol	69.13	64.78
OQU78964	Sorghum	cytosol	69.8	63.03
Bra035972.1-P	Field mustard	cytosol	44.97	60.36
TraesCS7A01G050500.1	Wheat	cytosol	65.1	59.51
Os12t0228800-01	Rice	cytosol	66.44	58.93
Bra034870.1-P	Field mustard	cytosol	66.44	58.58
Bra037722.1-P	Field mustard	cytosol	66.44	58.58
Bra019554.1-P	Field mustard	cytosol	66.44	58.58
TraesCS7D01G045800.1	Wheat	cytosol	65.1	56.07
TraesCS4A01G436700.1	Wheat	cytosol	64.43	55.17
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	76.51	51.58
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	65.77	50.0
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	65.1	48.99
HORVU7Hr1G008910.2	Barley	cytosol	69.8	48.6
Bra003376.1-P	Field mustard	vacuole	63.76	46.8
TraesCS2B01G367500.1	Wheat	plastid	64.43	44.86
TraesCS2A01G349100.1	Wheat	plastid	63.76	44.19
TraesCS2D01G347500.1	Wheat	plastid	64.43	43.64
Bra004165.1-P	Field mustard	cytosol	41.61	40.52
Zm00001d003197_P001	Maize	plastid	59.73	40.09
EES11048	Sorghum	plastid	62.42	39.08
Bra032785.1-P	Field mustard	cytosol	33.56	39.06
Bra025439.1-P	Field mustard	cytosol	39.6	36.88
Bra015979.1-P	Field mustard	cytosol	38.93	36.48
Bra016936.1-P	Field mustard	cytosol	25.5	36.19
Bra012497.1-P	Field mustard	cytosol	42.28	34.24
Bra010974.1-P	Field mustard	cytosol	42.95	34.22
Bra016564.1-P	Field mustard	cytosol	39.6	33.91
Bra020916.1-P	Field mustard	cytosol, plastid	40.27	32.61
Bra025924.1-P	Field mustard	cytosol	36.24	32.34
Bra013470.1-P	Field mustard	cytosol	40.27	31.91
Bra039511.1-P	Field mustard	cytosol	38.93	31.87
Bra033745.1-P	Field mustard	cytosol	38.93	31.87
Bra039845.1-P	Field mustard	plastid	36.91	29.1
Bra029821.1-P	Field mustard	plastid	33.56	24.04
Bra038801.1-P	Field mustard	cytosol	41.61	23.75
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	32.89	23.0

Protein Annotations

EnsemblPlants:Bra040379.1	EnsemblPlants:Bra040379.1-P	EnsemblPlantsGene:Bra040379	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002544769	UniProt:M4FH01	MapMan:35.1	:

Description

AT3G07490 (E=1e-058) AGD11 | AGD11 (ARF-GAP domain 11); calcium ion binding

Coordinates

chrA01:-:27926843..27927292

Molecular Weight (calculated)

16997.3 Da

IEP (calculated)

4.122

GRAVY (calculated)

-0.501

Length

149 amino acids

Sequence
(BLAST)

001: MDQAELCRIF QMFDKNGDGK ITKQELNDSL KNLGIYIPEQ ELVQMIEKID LNGDGYVDSE EFGGLFETIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLDECKRM IGKVDVDGDG MVDFKEFKKM MKAGGFAAL

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.