Factsheet for Bra025924.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70127	Canola	cytosol	99.4	99.4
AT1G18210.1	Thale cress	cytosol	88.62	87.06
Bra016564.1-P	Field mustard	cytosol	85.63	82.18
Bra015979.1-P	Field mustard	cytosol	67.66	71.07
PGSC0003DMT400074098	Potato	cytosol	47.9	51.95
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	47.9	51.95
PGSC0003DMT400014742	Potato	cytosol	50.9	51.83
KRH41828	Soybean	cytosol	55.69	51.67
KRH24162	Soybean	cytosol	43.11	51.43
Solyc03g118810.1.1	Tomato	cytosol	49.7	50.61
KRH48613	Soybean	cytosol	53.89	50.28
KRH02767	Soybean	cytosol	44.31	48.68
KRH15405	Soybean	cytosol	41.92	48.61
TraesCS1A01G134000.1	Wheat	cytosol	46.71	45.35
TraesCS1B01G148000.1	Wheat	cytosol	46.11	44.77
TraesCS1D01G125800.1	Wheat	cytosol	46.11	44.77
Bra004165.1-P	Field mustard	cytosol	40.72	44.44
EES19251	Sorghum	cytosol	45.51	42.46
KRH16247	Soybean	cytosol	32.93	41.98
Bra025439.1-P	Field mustard	cytosol	40.12	41.88
KRH60530	Soybean	plastid	53.89	41.67
Os05t0223000-01	Rice	plasma membrane	45.51	40.21
Bra032677.1-P	Field mustard	cytosol	36.53	40.13
Bra034907.1-P	Field mustard	cytosol	35.93	39.47
Bra032785.1-P	Field mustard	cytosol	29.94	39.06
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	41.32	38.98
GSMUA_Achr11P...	Banana	cytosol, plastid	40.12	38.95
TraesCS3D01G041500.1	Wheat	cytosol	42.52	38.38
TraesCS3A01G038300.1	Wheat	cytosol	42.52	38.17
TraesCS3B01G045500.1	Wheat	cytosol	42.52	37.97
HORVU4Hr1G081250.1	Barley	cytosol	13.77	37.7
HORVU3Hr1G007420.1	Barley	cytosol	41.92	37.63
Os01t0135700-01	Rice	plasma membrane	40.12	37.02
Bra040379.1-P	Field mustard	cytosol	32.34	36.24
Bra001254.1-P	Field mustard	cytosol	32.93	35.95
Bra012497.1-P	Field mustard	cytosol	39.52	35.87
Bra016936.1-P	Field mustard	cytosol	22.16	35.24
Bra035972.1-P	Field mustard	cytosol	23.35	35.14
Bra010974.1-P	Field mustard	cytosol	38.92	34.76
HORVU1Hr1G029850.1	Barley	cytosol	45.51	33.33
Bra019554.1-P	Field mustard	cytosol	33.53	33.14
Bra037722.1-P	Field mustard	cytosol	33.53	33.14
Bra034870.1-P	Field mustard	cytosol	33.53	33.14
Bra000836.1-P	Field mustard	cytosol	30.54	33.12
Bra039845.1-P	Field mustard	plastid	36.53	32.28
EES00360	Sorghum	cytosol	39.52	32.04
HORVU6Hr1G076690.1	Barley	cytosol	28.74	32.0
HORVU7Hr1G101640.1	Barley	cytosol, plastid	28.74	31.58
GSMUA_Achr6P09820_001	Banana	cytosol	49.1	31.42
HORVU1Hr1G074240.1	Barley	cytosol, plastid	28.14	31.33
HORVU6Hr1G034200.1	Barley	cytosol, plastid	29.34	30.82
Zm00001d039944_P001	Maize	cytosol, plastid	35.93	30.77
Zm00001d008573_P001	Maize	plastid	37.72	30.73
HORVU5Hr1G018360.1	Barley	cytosol, plastid	27.54	30.46
HORVU0Hr1G031990.1	Barley	cytosol, plastid	28.14	29.75
HORVU4Hr1G032570.1	Barley	cytosol, plastid	26.35	29.33
HORVU7Hr1G029640.1	Barley	cytosol, plastid	27.54	29.3
TraesCS3D01G041400.1	Wheat	cytosol, plastid	41.32	28.99
HORVU1Hr1G023720.1	Barley	cytosol, plastid	27.54	28.75
HORVU4Hr1G085560.1	Barley	cytosol, plastid	29.94	28.25
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	32.93	27.78
Bra003376.1-P	Field mustard	vacuole	33.53	27.59
Bra033745.1-P	Field mustard	cytosol	29.34	26.92
Bra039511.1-P	Field mustard	cytosol	28.74	26.37
HORVU5Hr1G077930.1	Barley	cytosol	23.35	26.17
Bra029821.1-P	Field mustard	plastid	31.74	25.48
HORVU5Hr1G117570.1	Barley	cytosol	19.76	25.38
Bra013470.1-P	Field mustard	cytosol	27.54	24.47
Bra020916.1-P	Field mustard	cytosol, plastid	26.95	24.46
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	28.74	22.54
HORVU5Hr1G073590.1	Barley	cytosol, plastid	20.36	18.68
Bra038801.1-P	Field mustard	cytosol	27.54	17.62

Protein Annotations

EnsemblPlants:Bra025924.1	EnsemblPlants:Bra025924.1-P	EnsemblPlantsGene:Bra025924	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF698	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000253F3DA	UniProt:M4EAW5	MapMan:35.1	:	:

Description

AT1G18210 (E=2e-076) | calcium-binding protein, putative

Coordinates

chrA06:-:6978669..6979172

Molecular Weight (calculated)

17908.6 Da

IEP (calculated)

3.977

GRAVY (calculated)

-0.427

Length

167 amino acids

Sequence
(BLAST)

001: MASGNPVTAK PTPTPVDMAN PEELKKVFDQ FDSNGDGKIS VTELGGVFKA MGTSYTETEI NRVLEEVDTD RDGFINVDEF SALCRSSSSA SEIRDAFDLY
101: DQDKNGLISA AELHQVLNRL GMSCSVEDCA KMIGPVDADG DGNVNFEEFQ KMMTSSSLAN SNNGSSA

Best Arabidopsis Sequence Match ( AT1G18210.2 )
(BLAST)

001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST

Arabidopsis Description

CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.