CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025924.1-P	Field mustard	cytosol	99.4	99.4
CDY19196	Canola	cytosol	97.6	92.09
AT1G18210.1	Thale cress	cytosol	89.22	87.65
CDX96729	Canola	cytosol	86.83	83.33
CDX83860	Canola	cytosol	87.43	82.49
CDX72996	Canola	cytosol	67.66	71.07
CDX96488	Canola	cytosol	67.66	71.07
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	47.9	51.95
PGSC0003DMT400074098	Potato	cytosol	47.9	51.95
PGSC0003DMT400014742	Potato	cytosol	50.9	51.83
KRH41828	Soybean	cytosol	55.69	51.67
KRH24162	Soybean	cytosol	43.11	51.43
Solyc03g118810.1.1	Tomato	cytosol	49.7	50.61
KRH48613	Soybean	cytosol	53.89	50.28
KRH02767	Soybean	cytosol	44.31	48.68
KRH15405	Soybean	cytosol	41.92	48.61
TraesCS1A01G134000.1	Wheat	cytosol	47.31	45.93
TraesCS1D01G125800.1	Wheat	cytosol	46.71	45.35
TraesCS1B01G148000.1	Wheat	cytosol	46.71	45.35
CDY55679	Canola	cytosol	41.32	45.1
CDX96150	Canola	cytosol	40.72	44.44
EES19251	Sorghum	cytosol	45.51	42.46
CDX99691	Canola	cytosol	40.12	42.41
CDY27652	Canola	cytosol	40.12	42.14
KRH16247	Soybean	cytosol	32.93	41.98
KRH60530	Soybean	plastid	53.89	41.67
Os05t0223000-01	Rice	plasma membrane	45.51	40.21
CDY39714	Canola	cytosol	36.53	40.13
CDY33702	Canola	cytosol	35.93	39.47
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	41.32	38.98
GSMUA_Achr11P...	Banana	cytosol, plastid	40.12	38.95
TraesCS3D01G041500.1	Wheat	cytosol	43.11	38.92
TraesCS3A01G038300.1	Wheat	cytosol	43.11	38.71
TraesCS3B01G045500.1	Wheat	cytosol	43.11	38.5
HORVU3Hr1G007420.1	Barley	cytosol	42.52	38.17
HORVU4Hr1G081250.1	Barley	cytosol	13.77	37.7
CDY21953	Canola	cytosol	34.13	37.5
CDX86544	Canola	cytosol	33.53	37.09
CDY63788	Canola	cytosol	33.53	37.09
Os01t0135700-01	Rice	plasma membrane	40.12	37.02
CDY60818	Canola	cytosol	32.34	36.24
CDY22119	Canola	cytosol	32.93	36.18
CDX74043	Canola	cytosol	32.93	35.95
CDY07993	Canola	cytosol	32.93	35.95
CDY03874	Canola	cytosol	39.52	35.87
CDY40786	Canola	cytosol	39.52	35.87
CDX84967	Canola	cytosol	39.52	34.92
CDY36129	Canola	cytosol	38.92	34.76
CDY27574	Canola	cytosol	39.52	34.55
HORVU1Hr1G029850.1	Barley	cytosol	46.11	33.77
CDX90890	Canola	cytosol	30.54	33.12
CDY66855	Canola	plastid	37.13	32.8
CDY37233	Canola	plastid	36.53	32.28
EES00360	Sorghum	cytosol	39.52	32.04
HORVU6Hr1G076690.1	Barley	cytosol	28.74	32.0
HORVU7Hr1G101640.1	Barley	cytosol, plastid	28.74	31.58
GSMUA_Achr6P09820_001	Banana	cytosol	49.1	31.42
HORVU1Hr1G074240.1	Barley	cytosol, plastid	28.14	31.33
HORVU6Hr1G034200.1	Barley	cytosol, plastid	29.34	30.82
Zm00001d039944_P001	Maize	cytosol, plastid	35.93	30.77
Zm00001d008573_P001	Maize	plastid	37.72	30.73
HORVU5Hr1G018360.1	Barley	cytosol, plastid	27.54	30.46
HORVU0Hr1G031990.1	Barley	cytosol, plastid	28.14	29.75
TraesCS3D01G041400.1	Wheat	cytosol, plastid	41.92	29.41
HORVU4Hr1G032570.1	Barley	cytosol, plastid	26.35	29.33
HORVU7Hr1G029640.1	Barley	cytosol, plastid	27.54	29.3
HORVU1Hr1G023720.1	Barley	cytosol, plastid	27.54	28.75
CDY17950	Canola	cytosol	28.14	28.31
HORVU4Hr1G085560.1	Barley	cytosol, plastid	29.94	28.25
CDX67796	Canola	vacuole	34.13	28.08
CDY06002	Canola	extracellular, vacuole	32.93	27.78
CDY72611	Canola	extracellular, vacuole	32.93	27.5
CDX98375	Canola	endoplasmic reticulum	33.53	27.45
CDY30399	Canola	extracellular	34.13	27.14
CDY23356	Canola	vacuole	34.13	27.01
CDY49013	Canola	cytosol	29.34	26.92
CDX94789	Canola	cytosol	28.74	26.37
CDY14927	Canola	cytosol	28.74	26.37
HORVU5Hr1G077930.1	Barley	cytosol	23.35	26.17
CDX83488	Canola	extracellular	33.53	26.17
CDY00910	Canola	cytosol, plastid	34.13	26.15
HORVU5Hr1G117570.1	Barley	cytosol	19.76	25.38
CDX94006	Canola	cytosol	28.14	25.27
CDX82773	Canola	cytosol	28.74	25.13
CDY60169	Canola	cytosol, plastid	31.14	25.0
CDX96968	Canola	cytosol	28.74	24.87
CDX79002	Canola	cytosol	27.54	24.47
CDY31433	Canola	cytosol, plastid	26.95	24.46
CDX76451	Canola	cytosol, plastid	26.95	24.46
CDY24421	Canola	endoplasmic reticulum, golgi	38.92	23.99
CDY23852	Canola	cytosol, mitochondrion, plastid	29.94	23.47
CDY06925	Canola	cytosol, mitochondrion, plastid	29.34	22.58
CDX79938	Canola	cytosol, mitochondrion, plastid	28.74	22.54
CDY14768	Canola	cytosol, mitochondrion, plastid	28.14	21.66
CDY44217	Canola	endoplasmic reticulum, golgi	32.34	19.15
HORVU5Hr1G073590.1	Barley	cytosol, plastid	20.36	18.68
CDX98672	Canola	cytosol	27.54	18.11

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078JWZ2	UniProt:A0A078JWZ2	EnsemblPlants:CDY70127	ProteinID:CDY70127
ProteinID:CDY70127.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00096568001	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10891	PANTHER:PTHR10891:SF698	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EF3A5C	SEG:seg

Description

BnaA06g38470DBnaA06g38470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWZ2]

Coordinates

chrLK041249:+:2616..3429

Molecular Weight (calculated)

17878.6 Da

IEP (calculated)

3.977

GRAVY (calculated)

-0.412

Length

167 amino acids

Sequence
(BLAST)

001: MASGNPVTAK PTPAPVDMAN PEELKKVFDQ FDSNGDGKIS VTELGGVFKA MGTSYTETEI NRVLEEVDTD RDGFINVDEF SALCRSSSSA SEIRDAFDLY
101: DQDKNGLISA AELHQVLNRL GMSCSVEDCA KMIGPVDADG DGNVNFEEFQ KMMTSSSLAN SNNGSSA

Best Arabidopsis Sequence Match ( AT1G18210.2 )
(BLAST)

001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST

Arabidopsis Description

CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.