Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007450.1-P | Field mustard | endoplasmic reticulum, vacuole | 98.99 | 98.99 |
| CDY72611 | Canola | extracellular, vacuole | 98.48 | 97.5 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 87.88 | 89.23 |
| CDX67796 | Canola | vacuole | 90.4 | 88.18 |
| CDX98375 | Canola | endoplasmic reticulum | 90.4 | 87.75 |
| CDY23356 | Canola | vacuole | 75.76 | 71.09 |
| CDY30399 | Canola | extracellular | 75.25 | 70.95 |
| CDY07993 | Canola | cytosol | 54.04 | 69.93 |
| CDX74043 | Canola | cytosol | 53.54 | 69.28 |
| CDY63788 | Canola | cytosol | 52.53 | 68.87 |
| CDX86544 | Canola | cytosol | 52.53 | 68.87 |
| PGSC0003DMT400018016 | Potato | cytosol | 51.52 | 68.0 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 51.52 | 68.0 |
| KRH29625 | Soybean | cytosol | 36.36 | 67.92 |
| CDX83488 | Canola | extracellular | 72.73 | 67.29 |
| CDY60818 | Canola | cytosol | 48.99 | 65.1 |
| CDX90890 | Canola | cytosol | 50.0 | 64.29 |
| CDY22119 | Canola | cytosol | 48.99 | 63.82 |
| CDY21953 | Canola | cytosol | 48.48 | 63.16 |
| CDY33702 | Canola | cytosol | 46.97 | 61.18 |
| CDY39714 | Canola | cytosol | 46.46 | 60.53 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 62.63 | 57.94 |
| CDY17950 | Canola | cytosol | 47.47 | 56.63 |
| Solyc11g044920.1.1 | Tomato | cytosol | 33.84 | 55.37 |
| KRH24625 | Soybean | cytosol | 61.11 | 54.75 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 59.6 | 53.88 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 70.2 | 49.29 |
| CDX96150 | Canola | cytosol | 30.81 | 39.87 |
| CDY55679 | Canola | cytosol | 30.3 | 39.22 |
| CDX99691 | Canola | cytosol | 30.81 | 38.61 |
| CDY27652 | Canola | cytosol | 30.81 | 38.36 |
| CDX94006 | Canola | cytosol | 32.83 | 34.95 |
| CDX94789 | Canola | cytosol | 31.31 | 34.07 |
| CDY49013 | Canola | cytosol | 30.81 | 33.52 |
| CDX96729 | Canola | cytosol | 29.29 | 33.33 |
| CDY14927 | Canola | cytosol | 30.3 | 32.97 |
| CDY70127 | Canola | cytosol | 27.78 | 32.93 |
| CDX96488 | Canola | cytosol | 25.76 | 32.08 |
| CDX72996 | Canola | cytosol | 25.76 | 32.08 |
| CDX79002 | Canola | cytosol | 30.3 | 31.91 |
| CDY37233 | Canola | plastid | 30.3 | 31.75 |
| CDY66855 | Canola | plastid | 30.3 | 31.75 |
| CDY19196 | Canola | cytosol | 28.28 | 31.64 |
| CDY31433 | Canola | cytosol, plastid | 29.29 | 31.52 |
| CDX76451 | Canola | cytosol, plastid | 29.29 | 31.52 |
| CDX96968 | Canola | cytosol | 30.3 | 31.09 |
| CDX83860 | Canola | cytosol | 27.78 | 31.07 |
| CDX82773 | Canola | cytosol | 29.8 | 30.89 |
| CDY36129 | Canola | cytosol | 28.79 | 30.48 |
| CDY40786 | Canola | cytosol | 28.28 | 30.43 |
| CDY03874 | Canola | cytosol | 28.28 | 30.43 |
| CDX84967 | Canola | cytosol | 28.28 | 29.63 |
| CDY27574 | Canola | cytosol | 28.28 | 29.32 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 26.77 | 24.88 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 26.26 | 24.41 |
| CDX98672 | Canola | cytosol | 31.31 | 24.41 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 25.76 | 23.5 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 24.75 | 22.58 |
| CDY60169 | Canola | cytosol, plastid | 23.23 | 22.12 |
| CDY00910 | Canola | cytosol, plastid | 23.23 | 21.1 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 28.79 | 21.03 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078EYE0 | EnsemblPlants:CDY06002 | ProteinID:CDY06002 | ProteinID:CDY06002.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| EnsemblPlantsGene:GSBRNA2T00121845001 | InterPro:IPR002048 | PFAM:PF13499 | PRINTS:PR01697 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF662 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI0004EE4D36 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g37780D
Coordinates
chrLK031967:-:172544..173140
Molecular Weight (calculated)
22569.1 Da
IEP (calculated)
4.323
GRAVY (calculated)
-0.406
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRVILLYNL LNSFLLCLVP KKLRVLFPPS WYTDDKITPP SESECSLRTD PVDLKRVFQM FDKNGDGRIT KEELNDSLEN LGIFMPDKDL IQMIRKMDAN
101: GDGCVDINEF ESLYGSIVEE KEEEDMRDAF NVFDQDGDGF ISVEELKSVM ASLGLKQGKT LKCCKEMITQ VDEDGDGRVN YKEFLQMMKS GGFSNRSS
101: GDGCVDINEF ESLYGSIVEE KEEEDMRDAF NVFDQDGDGF ISVEELKSVM ASLGLKQGKT LKCCKEMITQ VDEDGDGRVN YKEFLQMMKS GGFSNRSS
001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
Arabidopsis Description
CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.