CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032785.1-P	Field mustard	cytosol	67.02	100.0
CDX84967	Canola	cytosol	98.95	100.0
CDY36129	Canola	cytosol	90.58	92.51
AT1G24620.1	Thale cress	cytosol	90.05	92.47
CDY03874	Canola	cytosol	84.82	88.04
CDY40786	Canola	cytosol	84.82	88.04
CDY24421	Canola	endoplasmic reticulum, golgi	89.01	62.73
KRH75577	Soybean	cytosol	47.12	59.21
KRH37459	Soybean	cytosol	30.89	57.84
Solyc01g005370.2.1	Tomato	cytosol	51.83	57.56
PGSC0003DMT400025178	Potato	cytosol	51.83	56.9
Solyc04g008000.2.1	Tomato	cytosol, plastid	54.97	54.97
KRH49632	Soybean	cytosol, mitochondrion, plastid	51.83	54.4
KRH60410	Soybean	cytosol, plastid	52.36	53.19
PGSC0003DMT400075801	Potato	plastid	53.93	53.09
CDY60818	Canola	cytosol	32.98	42.28
CDX90890	Canola	cytosol	33.51	41.56
CDY55679	Canola	cytosol	32.98	41.18
CDY22119	Canola	cytosol	32.46	40.79
CDY21953	Canola	cytosol	32.46	40.79
CDX96150	Canola	cytosol	32.46	40.52
CDX99691	Canola	cytosol	33.51	40.51
CDX86544	Canola	cytosol	31.94	40.4
CDY63788	Canola	cytosol	31.94	40.4
CDY27652	Canola	cytosol	33.51	40.25
Os01t0949500-01	Rice	plasma membrane	38.74	40.0
CDX74043	Canola	cytosol	31.94	39.87
CDY07993	Canola	cytosol	31.94	39.87
CDX96729	Canola	cytosol	36.13	39.66
CDY19196	Canola	cytosol	36.65	39.55
CDX83860	Canola	cytosol	36.65	39.55
CDY70127	Canola	cytosol	34.55	39.52
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	38.22	39.25
CDX96488	Canola	cytosol	32.46	38.99
CDX72996	Canola	cytosol	32.46	38.99
CDY39714	Canola	cytosol	30.89	38.82
EES04217	Sorghum	cytosol, mitochondrion, plastid	38.22	38.62
TraesCS3B01G538300.1	Wheat	cytosol, plastid	38.22	38.42
TraesCS3B01G536200.1	Wheat	cytosol, plastid	38.22	38.42
TraesCS3D01G483200.1	Wheat	cytosol, plastid	38.22	38.22
TraesCS3A01G488400.1	Wheat	cytosol, plastid	38.22	38.22
CDY33702	Canola	cytosol	30.37	38.16
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	37.7	38.1
HORVU3Hr1G107090.2	Barley	cytosol, plastid	37.7	37.7
TraesCS1D01G239000.1	Wheat	mitochondrion	36.65	37.04
TraesCS1B01G250900.1	Wheat	mitochondrion	36.65	37.04
TraesCS1A01G238800.1	Wheat	mitochondrion	36.65	37.04
CDY17950	Canola	cytosol	31.94	36.75
Zm00001d042107_P001	Maize	mitochondrion	37.17	36.6
HORVU1Hr1G057410.1	Barley	mitochondrion	36.13	36.51
Os05t0380900-01	Rice	cytosol, mitochondrion	36.65	34.83
EES19444	Sorghum	plastid	36.13	34.67
Zm00001d038061_P001	Maize	mitochondrion	36.65	34.31
CDY49013	Canola	cytosol	29.84	31.32
CDX94789	Canola	cytosol	29.84	31.32
CDY66855	Canola	plastid	30.37	30.69
CDX76451	Canola	cytosol, plastid	29.32	30.43
CDY31433	Canola	cytosol, plastid	29.32	30.43
CDX79002	Canola	cytosol	29.84	30.32
CDY14927	Canola	cytosol	28.8	30.22
CDX94006	Canola	cytosol	29.32	30.11
CDY30399	Canola	extracellular	32.98	30.0
CDX82773	Canola	cytosol	29.84	29.84
CDY37233	Canola	plastid	29.32	29.63
CDY23356	Canola	vacuole	32.46	29.38
CDX83488	Canola	extracellular	31.94	28.5
CDX96968	Canola	cytosol	28.8	28.5
CDY06002	Canola	extracellular, vacuole	29.32	28.28
CDX67796	Canola	vacuole	29.84	28.08
CDY72611	Canola	extracellular, vacuole	29.32	28.0
CDX98375	Canola	endoplasmic reticulum	29.84	27.94
CDY60169	Canola	cytosol, plastid	28.8	26.44
CDY00910	Canola	cytosol, plastid	29.84	26.15
CDY06925	Canola	cytosol, mitochondrion, plastid	29.32	25.81
CDY23852	Canola	cytosol, mitochondrion, plastid	28.27	25.35
CDY14768	Canola	cytosol, mitochondrion, plastid	28.27	24.88
CDX79938	Canola	cytosol, mitochondrion, plastid	27.75	24.88
CDX98672	Canola	cytosol	29.32	22.05
CDY44217	Canola	endoplasmic reticulum, golgi	31.94	21.63

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078GQV9	UniProt:A0A078GQV9	EnsemblPlants:CDY27574	ProteinID:CDY27574
ProteinID:CDY27574.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00038305001	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10891	PANTHER:PTHR10891:SF738	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EF0988	SEG:seg

Description

BnaA09g28330DBnaA09g28330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQV9]

Coordinates

chrLK032207:+:32834..33515

Molecular Weight (calculated)

20667.2 Da

IEP (calculated)

4.339

GRAVY (calculated)

-0.612

Length

191 amino acids

Sequence
(BLAST)

001: MFNKKNQSTG SGDGGSVSRT GADSPYLQKA RSGKTEIREL EAVFKKFDVN GDGKISSKEL GAIMASLGNE VPEEVLEKAI TEIDRKGDGY INFEEFVELN
101: TKGMDQNDVL ENLKDAFSVY DIDGNGSISA EELHEVLRSL GDECSIGECR KMIGGVDKDG DGTIDFEEFK IMMTMGSRRD NVMGGGGGGQ R

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.