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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27574 Canola cytosol 100.0 98.95
Bra032785.1-P Field mustard cytosol 66.67 98.44
CDY36129 Canola cytosol 91.53 92.51
AT1G24620.1 Thale cress cytosol 91.01 92.47
CDY40786 Canola cytosol 85.71 88.04
CDY03874 Canola cytosol 85.71 88.04
CDY24421 Canola endoplasmic reticulum, golgi 89.95 62.73
KRH75577 Soybean cytosol 47.62 59.21
KRH37459 Soybean cytosol 31.22 57.84
Solyc01g005370.2.1 Tomato cytosol 52.38 57.56
PGSC0003DMT400025178 Potato cytosol 52.38 56.9
Solyc04g008000.2.1 Tomato cytosol, plastid 55.56 54.97
KRH49632 Soybean cytosol, mitochondrion, plastid 52.38 54.4
KRH60410 Soybean cytosol, plastid 52.91 53.19
PGSC0003DMT400075801 Potato plastid 54.5 53.09
CDY60818 Canola cytosol 33.33 42.28
CDX90890 Canola cytosol 33.86 41.56
CDY55679 Canola cytosol 33.33 41.18
CDY22119 Canola cytosol 32.8 40.79
CDY21953 Canola cytosol 32.8 40.79
CDX96150 Canola cytosol 32.8 40.52
CDX99691 Canola cytosol 33.86 40.51
CDY63788 Canola cytosol 32.28 40.4
CDX86544 Canola cytosol 32.28 40.4
CDY27652 Canola cytosol 33.86 40.25
Os01t0949500-01 Rice plasma membrane 39.15 40.0
CDY07993 Canola cytosol 32.28 39.87
CDX74043 Canola cytosol 32.28 39.87
CDX96729 Canola cytosol 36.51 39.66
CDX83860 Canola cytosol 37.04 39.55
CDY19196 Canola cytosol 37.04 39.55
CDY70127 Canola cytosol 34.92 39.52
TraesCS3D01G484900.1 Wheat cytosol, mitochondrion 38.62 39.25
CDX96488 Canola cytosol 32.8 38.99
CDX72996 Canola cytosol 32.8 38.99
CDY39714 Canola cytosol 31.22 38.82
EES04217 Sorghum cytosol, mitochondrion, plastid 38.62 38.62
TraesCS3B01G538300.1 Wheat cytosol, plastid 38.62 38.42
TraesCS3B01G536200.1 Wheat cytosol, plastid 38.62 38.42
TraesCS3D01G483200.1 Wheat cytosol, plastid 38.62 38.22
TraesCS3A01G488400.1 Wheat cytosol, plastid 38.62 38.22
CDY33702 Canola cytosol 30.69 38.16
Zm00001d009985_P001 Maize cytosol, mitochondrion, plastid 38.1 38.1
HORVU3Hr1G107090.2 Barley cytosol, plastid 38.1 37.7
TraesCS1B01G250900.1 Wheat mitochondrion 37.04 37.04
TraesCS1A01G238800.1 Wheat mitochondrion 37.04 37.04
TraesCS1D01G239000.1 Wheat mitochondrion 37.04 37.04
CDY17950 Canola cytosol 32.28 36.75
Zm00001d042107_P001 Maize mitochondrion 37.57 36.6
HORVU1Hr1G057410.1 Barley mitochondrion 36.51 36.51
Os05t0380900-01 Rice cytosol, mitochondrion 37.04 34.83
EES19444 Sorghum plastid 36.51 34.67
Zm00001d038061_P001 Maize mitochondrion 37.04 34.31
CDY49013 Canola cytosol 30.16 31.32
CDX94789 Canola cytosol 30.16 31.32
CDY66855 Canola plastid 30.69 30.69
CDX76451 Canola cytosol, plastid 29.63 30.43
CDY31433 Canola cytosol, plastid 29.63 30.43
CDX79002 Canola cytosol 30.16 30.32
CDY14927 Canola cytosol 29.1 30.22
CDX94006 Canola cytosol 29.63 30.11
CDY30399 Canola extracellular 33.33 30.0
CDX82773 Canola cytosol 30.16 29.84
CDY37233 Canola plastid 29.63 29.63
CDY23356 Canola vacuole 32.8 29.38
CDX83488 Canola extracellular 32.28 28.5
CDX96968 Canola cytosol 29.1 28.5
CDY06002 Canola extracellular, vacuole 29.63 28.28
CDX67796 Canola vacuole 30.16 28.08
CDY72611 Canola extracellular, vacuole 29.63 28.0
CDX98375 Canola endoplasmic reticulum 30.16 27.94
CDY60169 Canola cytosol, plastid 29.1 26.44
CDY00910 Canola cytosol, plastid 30.16 26.15
CDY06925 Canola cytosol, mitochondrion, plastid 29.63 25.81
CDY23852 Canola cytosol, mitochondrion, plastid 28.57 25.35
CDY14768 Canola cytosol, mitochondrion, plastid 28.57 24.88
CDX79938 Canola cytosol, mitochondrion, plastid 28.04 24.88
CDX98672 Canola cytosol 29.63 22.05
CDY44217 Canola endoplasmic reticulum, golgi 32.28 21.63
Protein Annotations
EnsemblPlants:CDX84967EnsemblPlantsGene:GSBRNA2T00142356001Gene3D:1.10.238.10GO:A0A078D709GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR10891
PANTHER:PTHR10891:SF738PFAM:PF13499PFscan:PS50222ProteinID:CDX84967ProteinID:CDX84967.1ScanProsite:PS00018
SMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EB49F9MapMan:35.1::
Description
BnaC05g20880D
Coordinates
chrLK031839:-:805012..805780
Molecular Weight (calculated)
20553.1 Da
IEP (calculated)
4.339
GRAVY (calculated)
-0.614
Length
189 amino acids
Sequence
(BLAST)
001: MFNKKNQSTG SGDGGSVSRT GADSPYLQKA RSGKTEIREL EAVFKKFDVN GDGKISSKEL GAIMASLGNE VPEEVLEKAI TEIDRKGDGY INFEEFVELN
101: TKGMDQNDVL ENLKDAFSVY DIDGNGSISA EELHEVLRSL GDECSIGECR KMIGGVDKDG DGTIDFEEFK IMMTMGSRRD NVMGGGGQR
Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.