CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016564.1-P	Field mustard	cytosol	96.55	96.55
CDX83860	Canola	cytosol	91.95	90.4
CDY70127	Canola	cytosol	83.33	86.83
AT1G18210.1	Thale cress	cytosol	84.48	86.47
CDY19196	Canola	cytosol	87.93	86.44
CDX72996	Canola	cytosol	63.79	69.81
CDX96488	Canola	cytosol	63.79	69.81
KRH41828	Soybean	cytosol	54.6	52.78
PGSC0003DMT400074098	Potato	cytosol	45.98	51.95
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	45.98	51.95
KRH24162	Soybean	cytosol	40.23	50.0
PGSC0003DMT400014742	Potato	cytosol	47.13	50.0
KRH48613	Soybean	cytosol	50.57	49.16
Solyc03g118810.1.1	Tomato	cytosol	45.4	48.17
KRH02767	Soybean	cytosol	41.38	47.37
KRH15405	Soybean	cytosol	39.08	47.22
TraesCS1A01G134000.1	Wheat	cytosol	43.1	43.6
CDX96150	Canola	cytosol	37.93	43.14
CDY55679	Canola	cytosol	37.93	43.14
TraesCS1D01G125800.1	Wheat	cytosol	42.53	43.02
TraesCS1B01G148000.1	Wheat	cytosol	42.53	43.02
KRH16247	Soybean	cytosol	31.61	41.98
KRH60530	Soybean	plastid	51.15	41.2
EES19251	Sorghum	cytosol	41.38	40.22
CDY60818	Canola	cytosol	33.91	39.6
CDX99691	Canola	cytosol	35.63	39.24
CDY27652	Canola	cytosol	35.63	38.99
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	38.51	37.85
GSMUA_Achr11P...	Banana	cytosol, plastid	37.36	37.79
Os05t0223000-01	Rice	plasma membrane	40.8	37.57
CDY40786	Canola	cytosol	39.66	37.5
CDY03874	Canola	cytosol	39.66	37.5
CDY36129	Canola	cytosol	40.23	37.43
CDY63788	Canola	cytosol	32.18	37.09
CDX86544	Canola	cytosol	32.18	37.09
CDY21953	Canola	cytosol	32.18	36.84
CDY33702	Canola	cytosol	32.18	36.84
CDY39714	Canola	cytosol	32.18	36.84
CDX74043	Canola	cytosol	32.18	36.6
CDY07993	Canola	cytosol	32.18	36.6
CDX84967	Canola	cytosol	39.66	36.51
TraesCS3B01G045500.1	Wheat	cytosol	39.08	36.36
CDY22119	Canola	cytosol	31.61	36.18
CDY27574	Canola	cytosol	39.66	36.13
TraesCS3D01G041500.1	Wheat	cytosol	37.93	35.68
TraesCS3A01G038300.1	Wheat	cytosol	37.93	35.48
HORVU3Hr1G007420.1	Barley	cytosol	37.93	35.48
Os01t0135700-01	Rice	plasma membrane	36.78	35.36
HORVU4Hr1G081250.1	Barley	cytosol	12.07	34.43
CDX90890	Canola	cytosol	30.46	34.42
CDY66855	Canola	plastid	35.63	32.8
CDY37233	Canola	plastid	35.06	32.28
HORVU1Hr1G029850.1	Barley	cytosol	41.38	31.58
EES00360	Sorghum	cytosol	36.78	31.07
GSMUA_Achr6P09820_001	Banana	cytosol	45.4	30.27
Zm00001d008573_P001	Maize	plastid	35.06	29.76
CDX67796	Canola	vacuole	34.48	29.56
CDY17950	Canola	cytosol	28.16	29.52
CDY06002	Canola	extracellular, vacuole	33.33	29.29
Zm00001d039944_P001	Maize	cytosol, plastid	32.76	29.23
CDY72611	Canola	extracellular, vacuole	33.33	29.0
HORVU1Hr1G074240.1	Barley	cytosol, plastid	24.71	28.67
HORVU6Hr1G076690.1	Barley	cytosol	24.71	28.67
CDX98375	Canola	endoplasmic reticulum	33.33	28.43
HORVU7Hr1G101640.1	Barley	cytosol, plastid	24.71	28.29
CDY30399	Canola	extracellular	33.91	28.1
CDY23356	Canola	vacuole	33.91	27.96
TraesCS3D01G041400.1	Wheat	cytosol, plastid	37.93	27.73
CDY49013	Canola	cytosol	28.74	27.47
HORVU7Hr1G029640.1	Barley	cytosol, plastid	24.71	27.39
HORVU5Hr1G018360.1	Barley	cytosol, plastid	23.56	27.15
HORVU6Hr1G034200.1	Barley	cytosol, plastid	24.71	27.04
CDX94789	Canola	cytosol	28.16	26.92
CDY14927	Canola	cytosol	28.16	26.92
HORVU1Hr1G023720.1	Barley	cytosol, plastid	24.71	26.88
HORVU4Hr1G032570.1	Barley	cytosol, plastid	22.99	26.67
CDX83488	Canola	extracellular	32.76	26.64
CDY00910	Canola	cytosol, plastid	33.33	26.61
HORVU0Hr1G031990.1	Barley	cytosol, plastid	24.14	26.58
CDX94006	Canola	cytosol	28.16	26.34
CDX82773	Canola	cytosol	28.74	26.18
CDX76451	Canola	cytosol, plastid	27.59	26.09
CDY31433	Canola	cytosol, plastid	27.59	26.09
HORVU4Hr1G085560.1	Barley	cytosol, plastid	26.44	25.99
CDY24421	Canola	endoplasmic reticulum, golgi	40.23	25.83
CDX79002	Canola	cytosol	27.59	25.53
CDY60169	Canola	cytosol, plastid	30.46	25.48
CDX96968	Canola	cytosol	28.16	25.39
CDX79938	Canola	cytosol, mitochondrion, plastid	29.31	23.94
CDY23852	Canola	cytosol, mitochondrion, plastid	29.31	23.94
HORVU5Hr1G117570.1	Barley	cytosol	17.82	23.85
CDY06925	Canola	cytosol, mitochondrion, plastid	29.31	23.5
CDY14768	Canola	cytosol, mitochondrion, plastid	29.31	23.5
HORVU5Hr1G077930.1	Barley	cytosol	19.54	22.82
CDY44217	Canola	endoplasmic reticulum, golgi	32.18	19.86
CDX98672	Canola	cytosol	28.16	19.29
HORVU5Hr1G073590.1	Barley	cytosol, plastid	17.82	17.03

Protein Annotations

EnsemblPlants:CDX96729	EnsemblPlantsGene:GSBRNA2T00102946001	Gene3D:1.10.238.10	GO:A0A078E7P6	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF698	PFAM:PF13499	PFscan:PS50222	ProteinID:CDX96729	ProteinID:CDX96729.1	ScanProsite:PS00018
SEG:seg	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EE3387	MapMan:35.1	:

Description

BnaA08g22720D

Coordinates

chrLK031895:+:748904..749666

Molecular Weight (calculated)

18600.2 Da

IEP (calculated)

4.010

GRAVY (calculated)

-0.505

Length

174 amino acids

Sequence
(BLAST)

001: MASTNPETAK AKPASVDIAN PEELKKVFDQ FDSNGDGKIS VAELGGVLKA MGTSYTETEL NRVLEDVDAD RDGYINVDEF STLCRSSSTA SEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSAEECT RMIGPVDADG DGNVNFEEFQ KMMTSSSLTN SNNGSTAAAN SSST

Best Arabidopsis Sequence Match ( AT1G18210.2 )
(BLAST)

001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST

Arabidopsis Description

CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.