CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039845.1-P	Field mustard	plastid	99.47	99.47
CDY66855	Canola	plastid	97.88	97.88
AT2G15680.1	Thale cress	plastid	86.24	87.17
KRH50269	Soybean	mitochondrion	59.79	61.08
KRH71148	Soybean	cytosol	58.73	60.0
VIT_03s0063g00530.t01	Wine grape	cytosol	57.67	59.89
Solyc01g108190.2.1	Tomato	plastid	50.26	51.35
HORVU5Hr1G068490.1	Barley	cytosol	23.28	51.16
PGSC0003DMT400066610	Potato	plastid	48.68	49.73
CDX96150	Canola	cytosol	35.45	43.79
CDY27652	Canola	cytosol	36.51	43.4
CDY55679	Canola	cytosol	34.92	43.14
CDX99691	Canola	cytosol	35.98	43.04
EER96860	Sorghum	cytosol, mitochondrion	41.27	42.39
Zm00001d020722_P001	Maize	cytosol, mitochondrion	40.21	41.3
TraesCS5A01G238900.1	Wheat	mitochondrion	38.62	39.89
Os09t0458700-01	Rice	cytosol, mitochondrion	38.62	39.46
TraesCS5D01G246000.1	Wheat	mitochondrion	37.57	38.8
TraesCS5B01G237500.1	Wheat	mitochondrion	37.57	38.8
CDY07993	Canola	cytosol	30.16	37.25
CDX74043	Canola	cytosol	30.16	37.25
CDY60818	Canola	cytosol	29.1	36.91
CDY70127	Canola	cytosol	32.28	36.53
CDY33702	Canola	cytosol	29.1	36.18
CDY22119	Canola	cytosol	29.1	36.18
CDY21953	Canola	cytosol	29.1	36.18
CDY39714	Canola	cytosol	29.1	36.18
GSMUA_Achr9P27060_001	Banana	plastid	37.57	36.04
CDY63788	Canola	cytosol	28.57	35.76
CDX86544	Canola	cytosol	28.57	35.76
CDX72996	Canola	cytosol	29.63	35.22
CDX96488	Canola	cytosol	29.63	35.22
CDX90890	Canola	cytosol	28.57	35.06
CDX96729	Canola	cytosol	32.28	35.06
CDY19196	Canola	cytosol	32.28	34.46
CDX83860	Canola	cytosol	31.75	33.9
CDY17950	Canola	cytosol	27.51	31.33
CDY06002	Canola	extracellular, vacuole	31.75	30.3
CDY72611	Canola	extracellular, vacuole	31.75	30.0
CDY36129	Canola	cytosol	29.63	29.95
CDY40786	Canola	cytosol	29.1	29.89
CDY03874	Canola	cytosol	29.1	29.89
CDX94789	Canola	cytosol	28.57	29.67
CDX84967	Canola	cytosol	29.63	29.63
CDX94006	Canola	cytosol	29.1	29.57
CDY30399	Canola	extracellular	32.8	29.52
CDX83488	Canola	extracellular	33.33	29.44
CDX98375	Canola	endoplasmic reticulum	31.75	29.41
CDY23356	Canola	vacuole	32.8	29.38
CDY27574	Canola	cytosol	29.63	29.32
CDY49013	Canola	cytosol	28.04	29.12
CDY14927	Canola	cytosol	28.04	29.12
CDX67796	Canola	vacuole	31.22	29.06
CDX79002	Canola	cytosol	28.57	28.72
CDY23852	Canola	cytosol, mitochondrion, plastid	31.75	28.17
CDX82773	Canola	cytosol	28.04	27.75
CDX76451	Canola	cytosol, plastid	26.98	27.72
CDY31433	Canola	cytosol, plastid	26.98	27.72
CDX79938	Canola	cytosol, mitochondrion, plastid	31.22	27.7
CDX96968	Canola	cytosol	28.04	27.46
CDY06925	Canola	cytosol, mitochondrion, plastid	30.69	26.73
CDY00910	Canola	cytosol, plastid	30.16	26.15
CDY60169	Canola	cytosol, plastid	28.57	25.96
CDY14768	Canola	cytosol, mitochondrion, plastid	29.63	25.81
CDX98672	Canola	cytosol	29.63	22.05
CDY44217	Canola	endoplasmic reticulum, golgi	32.8	21.99
CDY24421	Canola	endoplasmic reticulum, golgi	29.63	20.66

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078HK49	UniProt:A0A078HK49	EnsemblPlants:CDY37233	ProteinID:CDY37233
ProteinID:CDY37233.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00063720001	InterPro:IPR002048	PFAM:PF13499	PRINTS:PR00450	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF620	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EEF0C0
SEG:seg	:	:	:	:	:

Description

BnaA09g08540DBnaA09g08540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK49]

Coordinates

chrLK032395:+:278503..279072

Molecular Weight (calculated)

21509.9 Da

IEP (calculated)

9.182

GRAVY (calculated)

-0.513

Length

189 amino acids

Sequence
(BLAST)

001: MSNVNFLELQ YKLSKNKMLR KPSRLFSRDR QSSGLSSPGS VGVPQPTINE MRRVFNRFDS DKDGKISQTE YKVVLRALGQ ERAIQDVPKI FKAADLDGDG
101: FIDFKEFIDA HKRSGGIRSL DIRNAFWTFD LNGDGKISAE EVMSVLRKLG ERCNLEDCKR MVRAVDADGD GLVNMEEFMR MMTQSMNIV

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.