Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010974.1-P | Field mustard | cytosol | 67.16 | 97.33 |
| CDY36129 | Canola | cytosol | 67.16 | 97.33 |
| CDX84967 | Canola | cytosol | 62.73 | 89.95 |
| AT1G24620.1 | Thale cress | cytosol | 61.62 | 89.78 |
| CDY27574 | Canola | cytosol | 62.73 | 89.01 |
| CDY40786 | Canola | cytosol | 59.78 | 88.04 |
| CDY03874 | Canola | cytosol | 59.78 | 88.04 |
| KRH75577 | Soybean | cytosol | 33.21 | 59.21 |
| KRH37459 | Soybean | cytosol | 21.77 | 57.84 |
| Solyc01g005370.2.1 | Tomato | cytosol | 35.79 | 56.4 |
| PGSC0003DMT400025178 | Potato | cytosol | 35.79 | 55.75 |
| KRH49632 | Soybean | cytosol, mitochondrion, plastid | 36.9 | 54.95 |
| KRH60410 | Soybean | cytosol, plastid | 36.9 | 53.19 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 37.27 | 52.88 |
| PGSC0003DMT400075801 | Potato | plastid | 36.9 | 51.55 |
| CDY60818 | Canola | cytosol | 23.62 | 42.95 |
| CDX90890 | Canola | cytosol | 23.99 | 42.21 |
| CDX86544 | Canola | cytosol | 22.88 | 41.06 |
| CDY63788 | Canola | cytosol | 22.88 | 41.06 |
| CDY07993 | Canola | cytosol | 22.88 | 40.52 |
| CDY55679 | Canola | cytosol | 22.88 | 40.52 |
| CDX74043 | Canola | cytosol | 22.88 | 40.52 |
| CDX99691 | Canola | cytosol | 23.62 | 40.51 |
| CDY27652 | Canola | cytosol | 23.62 | 40.25 |
| CDX96729 | Canola | cytosol | 25.83 | 40.23 |
| CDY22119 | Canola | cytosol | 22.51 | 40.13 |
| CDY21953 | Canola | cytosol | 22.51 | 40.13 |
| CDX83860 | Canola | cytosol | 26.2 | 40.11 |
| CDX96150 | Canola | cytosol | 22.51 | 39.87 |
| CDX72996 | Canola | cytosol | 23.25 | 39.62 |
| CDX96488 | Canola | cytosol | 23.25 | 39.62 |
| CDY39714 | Canola | cytosol | 22.14 | 39.47 |
| Os01t0949500-01 | Rice | plasma membrane | 26.94 | 39.46 |
| CDY19196 | Canola | cytosol | 25.46 | 38.98 |
| CDY70127 | Canola | cytosol | 23.99 | 38.92 |
| CDY33702 | Canola | cytosol | 21.77 | 38.82 |
| TraesCS3D01G484900.1 | Wheat | cytosol, mitochondrion | 26.57 | 38.71 |
| EES04217 | Sorghum | cytosol, mitochondrion, plastid | 26.94 | 38.62 |
| TraesCS3B01G536200.1 | Wheat | cytosol, plastid | 26.57 | 37.89 |
| TraesCS3B01G538300.1 | Wheat | cytosol, plastid | 26.57 | 37.89 |
| TraesCS3D01G483200.1 | Wheat | cytosol, plastid | 26.57 | 37.7 |
| TraesCS3A01G488400.1 | Wheat | cytosol, plastid | 26.57 | 37.7 |
| Zm00001d009985_P001 | Maize | cytosol, mitochondrion, plastid | 26.2 | 37.57 |
| CDY17950 | Canola | cytosol | 22.88 | 37.35 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 26.2 | 37.17 |
| Zm00001d042107_P001 | Maize | mitochondrion | 26.2 | 36.6 |
| TraesCS1D01G239000.1 | Wheat | mitochondrion | 25.46 | 36.51 |
| TraesCS1A01G238800.1 | Wheat | mitochondrion | 25.46 | 36.51 |
| TraesCS1B01G250900.1 | Wheat | mitochondrion | 25.46 | 36.51 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 25.09 | 35.98 |
| Os05t0380900-01 | Rice | cytosol, mitochondrion | 25.46 | 34.33 |
| Zm00001d038061_P001 | Maize | mitochondrion | 25.46 | 33.82 |
| EES19444 | Sorghum | plastid | 24.72 | 33.67 |
| CDX94789 | Canola | cytosol | 21.03 | 31.32 |
| CDY49013 | Canola | cytosol | 21.03 | 31.32 |
| CDY66855 | Canola | plastid | 21.4 | 30.69 |
| CDX94006 | Canola | cytosol | 21.03 | 30.65 |
| CDY30399 | Canola | extracellular | 23.62 | 30.48 |
| CDY14927 | Canola | cytosol | 20.3 | 30.22 |
| CDX76451 | Canola | cytosol, plastid | 20.3 | 29.89 |
| CDY31433 | Canola | cytosol, plastid | 20.3 | 29.89 |
| CDY23356 | Canola | vacuole | 23.25 | 29.86 |
| CDX79002 | Canola | cytosol | 20.66 | 29.79 |
| CDY37233 | Canola | plastid | 20.66 | 29.63 |
| CDX82773 | Canola | cytosol | 20.66 | 29.32 |
| CDX83488 | Canola | extracellular | 22.88 | 28.97 |
| CDY06002 | Canola | extracellular, vacuole | 21.03 | 28.79 |
| CDX67796 | Canola | vacuole | 21.4 | 28.57 |
| CDY72611 | Canola | extracellular, vacuole | 21.03 | 28.5 |
| CDX96968 | Canola | cytosol | 20.3 | 28.5 |
| CDX98375 | Canola | endoplasmic reticulum | 21.4 | 28.43 |
| CDY60169 | Canola | cytosol, plastid | 19.56 | 25.48 |
| CDY00910 | Canola | cytosol, plastid | 20.3 | 25.23 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 19.93 | 24.88 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 19.19 | 24.41 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 19.19 | 23.96 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 18.82 | 23.94 |
| CDX98672 | Canola | cytosol | 21.03 | 22.44 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 22.88 | 21.99 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078GGC0 | UniProt:A0A078GGC0 | EnsemblPlants:CDY24421 | ProteinID:CDY24421 |
| ProteinID:CDY24421.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00026668001 | InterPro:IPR002048 |
| PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF738 | SMART:SM00054 |
| SUPFAM:SSF47473 | TMHMM:TMhelix | UniParc:UPI0004EC8701 | : | : | : |
Description
BnaCnng04880DBnaCnng04880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGC0]
Coordinates
chrLK032158:+:471768..474356
Molecular Weight (calculated)
29742.2 Da
IEP (calculated)
5.226
GRAVY (calculated)
-0.364
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSSAKYQID VIDVANIVGS VNSVTVTGLL FVGFAIFFCF KKRKAYHKMH LLQHYGDQDA LKITLENLHV GGSESGLSGS HAHVRFETMS NNKNQSNGSA
101: SRTGADSPFL HKARSGKTEI RELEAVFKKF DVNGDGKISS KELGAIMTSL GHEVPEEVLQ KAITDIDRKG DGYINFEEFV ELNTKGMDQN EVLENLKDAF
201: SVYDIDGNGS ISAEELHEVL RSLGDECSIA ECRKMIGGVD KDGDGTIDFE EFKIMMTLGS RRDNVMGGGQ R
101: SRTGADSPFL HKARSGKTEI RELEAVFKKF DVNGDGKISS KELGAIMTSL GHEVPEEVLQ KAITDIDRKG DGYINFEEFV ELNTKGMDQN EVLENLKDAF
201: SVYDIDGNGS ISAEELHEVL RSLGDECSIA ECRKMIGGVD KDGDGTIDFE EFKIMMTLGS RRDNVMGGGQ R
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.