Factsheet for Zm00001d009985_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19444	Sorghum	plastid	85.19	80.9
Zm00001d038061_P001	Maize	mitochondrion	87.3	80.88
TraesCS1B01G250900.1	Wheat	mitochondrion	76.19	76.19
HORVU1Hr1G057410.1	Barley	mitochondrion	75.66	75.66
TraesCS1A01G238800.1	Wheat	mitochondrion	73.55	73.55
TraesCS1D01G239000.1	Wheat	mitochondrion	73.55	73.55
Os05t0380900-01	Rice	cytosol, mitochondrion	71.43	67.16
Zm00001d042107_P001	Maize	mitochondrion	67.2	65.46
KRH75577	Soybean	cytosol	40.21	50.0
KRH60410	Soybean	cytosol, plastid	45.5	45.74
KRH49632	Soybean	cytosol, mitochondrion, plastid	42.86	44.51
PGSC0003DMT400025178	Potato	cytosol	39.15	42.53
Solyc01g005370.2.1	Tomato	cytosol	38.62	42.44
Solyc04g008000.2.1	Tomato	cytosol, plastid	42.33	41.88
PGSC0003DMT400075801	Potato	plastid	42.33	41.24
Bra032785.1-P	Field mustard	cytosol	27.51	40.62
CDY03874	Canola	cytosol	39.15	40.22
CDY40786	Canola	cytosol	39.15	40.22
AT1G24620.1	Thale cress	cytosol	39.15	39.78
Bra012497.1-P	Field mustard	cytosol	38.62	39.67
Zm00001d023992_P001	Maize	cytosol	33.33	39.62
KRH37459	Soybean	cytosol	21.16	39.22
Bra010974.1-P	Field mustard	cytosol	38.1	38.5
CDY36129	Canola	cytosol	38.1	38.5
CDX84967	Canola	cytosol	38.1	38.1
CDY27574	Canola	cytosol	38.1	37.7
Zm00001d008573_P001	Maize	plastid	37.57	34.63
Zm00001d039944_P001	Maize	cytosol, plastid	32.28	31.28
Zm00001d047535_P001	Maize	plastid	29.63	29.95
Zm00001d020722_P001	Maize	cytosol, mitochondrion	29.1	29.89
Zm00001d029028_P001	Maize	plastid	29.63	29.79
Zm00001d003197_P001	Maize	plastid	34.39	29.28
Zm00001d022430_P001	Maize	cytosol, plastid	30.69	29.0
Zm00001d007181_P001	Maize	plastid	30.69	28.57
Zm00001d042108_P001	Maize	cytosol, plastid	28.57	28.12
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	34.92	27.16
Zm00001d004972_P001	Maize	plastid	25.93	26.2
CDY24421	Canola	endoplasmic reticulum, golgi	37.57	26.2

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100280482	MapMan:35.1	ProteinID:AQK93188.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	UniProt:K7VUH8
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF635	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0002212D77	EnsemblPlantsGene:Zm00001d009985	EnsemblPlants:Zm00001d009985_P001	EnsemblPlants:Zm00001d009985_T001	SEG:seg

Description

Polcalcin Jun o 2

Coordinates

chr8:+:93476338..93476907

Molecular Weight (calculated)

19934.2 Da

IEP (calculated)

4.601

GRAVY (calculated)

-0.326

Length

189 amino acids

Sequence
(BLAST)

001: MGKVRSFFCR ARSGKRGGSR PGLSSSSLSS PCPSARRASP PAGDETERVF RKFDANGDGQ ISRSELAALF ESVGHAATDD EVSRMMEEAD ADGDGYISLP
101: EFAALMDSAS GDADAVEEDL RHAFSVFDAD GNGLITPAEL ARVLRGLGES ASVAQCRRMI QGVDRNGDGL VSFDEFKLMM AGGFGRIGA

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.