Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- plasma membrane 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075801 | Potato | plastid | 93.19 | 91.75 |
| Solyc01g005370.2.1 | Tomato | cytosol | 61.26 | 68.02 |
| KRH60410 | Soybean | cytosol, plastid | 63.87 | 64.89 |
| Bra032785.1-P | Field mustard | cytosol | 41.36 | 61.72 |
| KRH75577 | Soybean | cytosol | 48.17 | 60.53 |
| KRH49632 | Soybean | cytosol, mitochondrion, plastid | 57.07 | 59.89 |
| KRH37459 | Soybean | cytosol | 30.37 | 56.86 |
| Bra012497.1-P | Field mustard | cytosol | 54.45 | 56.52 |
| CDY03874 | Canola | cytosol | 54.45 | 56.52 |
| CDY40786 | Canola | cytosol | 54.45 | 56.52 |
| CDX84967 | Canola | cytosol | 54.97 | 55.56 |
| AT1G24620.1 | Thale cress | cytosol | 53.93 | 55.38 |
| Bra010974.1-P | Field mustard | cytosol | 53.93 | 55.08 |
| CDY36129 | Canola | cytosol | 53.93 | 55.08 |
| CDY27574 | Canola | cytosol | 54.97 | 54.97 |
| Solyc02g063350.1.1 | Tomato | cytosol | 38.74 | 51.03 |
| Solyc02g091500.1.1 | Tomato | cytosol | 40.31 | 49.36 |
| Os01t0949500-01 | Rice | plasma membrane | 46.07 | 47.57 |
| TraesCS3D01G483200.1 | Wheat | cytosol, plastid | 45.03 | 45.03 |
| TraesCS3A01G488400.1 | Wheat | cytosol, plastid | 45.03 | 45.03 |
| TraesCS3B01G538300.1 | Wheat | cytosol, plastid | 44.5 | 44.74 |
| TraesCS3B01G536200.1 | Wheat | cytosol, plastid | 44.5 | 44.74 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 44.5 | 44.5 |
| EES04217 | Sorghum | cytosol, mitochondrion, plastid | 43.98 | 44.44 |
| TraesCS3D01G484900.1 | Wheat | cytosol, mitochondrion | 42.93 | 44.09 |
| Zm00001d042107_P001 | Maize | mitochondrion | 43.46 | 42.78 |
| Zm00001d009985_P001 | Maize | cytosol, mitochondrion, plastid | 41.88 | 42.33 |
| Solyc06g083000.1.1 | Tomato | cytosol | 32.98 | 42.28 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 41.36 | 41.8 |
| TraesCS1B01G250900.1 | Wheat | mitochondrion | 41.36 | 41.8 |
| TraesCS1A01G238800.1 | Wheat | mitochondrion | 41.36 | 41.8 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 32.46 | 41.33 |
| TraesCS1D01G239000.1 | Wheat | mitochondrion | 40.84 | 41.27 |
| Solyc03g118810.1.1 | Tomato | cytosol | 35.08 | 40.85 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 32.46 | 40.26 |
| Solyc09g055880.1.1 | Tomato | cytosol | 31.41 | 40.0 |
| EES19444 | Sorghum | plastid | 41.36 | 39.7 |
| Os05t0380900-01 | Rice | cytosol, mitochondrion | 40.84 | 38.81 |
| Zm00001d038061_P001 | Maize | mitochondrion | 40.84 | 38.24 |
| Solyc11g044920.1.1 | Tomato | cytosol | 24.08 | 38.02 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 52.88 | 37.27 |
| Solyc02g065000.1.1 | Tomato | cytosol | 31.41 | 34.68 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 35.08 | 32.68 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 36.65 | 31.53 |
| Solyc01g108190.2.1 | Tomato | plastid | 29.32 | 30.27 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 28.27 | 27.14 |
| Solyc04g018110.1.1 | Tomato | plastid | 30.89 | 24.38 |
Protein Annotations
| EnsemblPlants:Solyc04g008000.2.1 | EnsemblPlantsGene:Solyc04g008000.2 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF738 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0002766D7E | UniProt:K4BNV6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4:-:1652161..1653061
Molecular Weight (calculated)
21163.2 Da
IEP (calculated)
4.151
GRAVY (calculated)
-0.260
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKSLFKIK KKDVPSGNPF VVNDNPMSVN LSRVSSIDSR ARIEEELEQV FKKFDVNGDG KICSSELGFI MASLGNRATE EELVNMIREV DSDGDGFIDL
101: QEFIELNTKD IDSNEVLESL KDAFSVFDMD KNGSISAEEL LTVLQSLGED CNLAECRKMI SGVDCDGDGM INFEEFKIMM AKGSRFDVKG C
101: QEFIELNTKD IDSNEVLESL KDAFSVFDMD KNGSISAEEL LTVLQSLGED CNLAECRKMI SGVDCDGDGM INFEEFKIMM AKGSRFDVKG C
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.