Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032785.1-P | Field mustard | cytosol | 64.52 | 93.75 |
| CDX84967 | Canola | cytosol | 92.47 | 91.01 |
| CDY27574 | Canola | cytosol | 92.47 | 90.05 |
| CDY36129 | Canola | cytosol | 89.78 | 89.3 |
| Bra010974.1-P | Field mustard | cytosol | 89.78 | 89.3 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 89.78 | 61.62 |
| KRH75577 | Soybean | cytosol | 48.92 | 59.87 |
| KRH37459 | Soybean | cytosol | 32.26 | 58.82 |
| Solyc01g005370.2.1 | Tomato | cytosol | 52.69 | 56.98 |
| PGSC0003DMT400025178 | Potato | cytosol | 52.69 | 56.32 |
| KRH49632 | Soybean | cytosol, mitochondrion, plastid | 53.76 | 54.95 |
| KRH60410 | Soybean | cytosol, plastid | 55.38 | 54.79 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 55.38 | 53.93 |
| PGSC0003DMT400075801 | Potato | plastid | 54.84 | 52.58 |
| AT4G03290.1 | Thale cress | cytosol | 34.95 | 42.21 |
| AT1G05990.1 | Thale cress | cytosol | 33.33 | 41.33 |
| AT1G73630.1 | Thale cress | cytosol | 36.02 | 41.1 |
| Os01t0949500-01 | Rice | plasma membrane | 40.86 | 41.08 |
| TraesCS3D01G484900.1 | Wheat | cytosol, mitochondrion | 40.32 | 40.32 |
| EES04217 | Sorghum | cytosol, mitochondrion, plastid | 40.86 | 40.21 |
| AT4G12860.1 | Thale cress | cytosol | 32.8 | 40.13 |
| AT1G66400.1 | Thale cress | cytosol | 33.87 | 40.13 |
| AT3G07490.1 | Thale cress | cytosol | 32.8 | 39.87 |
| TraesCS3B01G536200.1 | Wheat | cytosol, plastid | 40.32 | 39.47 |
| TraesCS3B01G538300.1 | Wheat | cytosol, plastid | 40.32 | 39.47 |
| AT1G18210.1 | Thale cress | cytosol | 36.02 | 39.41 |
| TraesCS3D01G483200.1 | Wheat | cytosol, plastid | 40.32 | 39.27 |
| TraesCS3A01G488400.1 | Wheat | cytosol, plastid | 40.32 | 39.27 |
| Zm00001d009985_P001 | Maize | cytosol, mitochondrion, plastid | 39.78 | 39.15 |
| AT5G37770.1 | Thale cress | cytosol | 33.87 | 39.13 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 39.78 | 38.74 |
| TraesCS1A01G238800.1 | Wheat | mitochondrion | 39.25 | 38.62 |
| TraesCS1B01G250900.1 | Wheat | mitochondrion | 39.25 | 38.62 |
| TraesCS1D01G239000.1 | Wheat | mitochondrion | 39.25 | 38.62 |
| Zm00001d042107_P001 | Maize | mitochondrion | 39.78 | 38.14 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 38.71 | 38.1 |
| Os05t0380900-01 | Rice | cytosol, mitochondrion | 38.71 | 35.82 |
| Zm00001d038061_P001 | Maize | mitochondrion | 38.71 | 35.29 |
| EES19444 | Sorghum | plastid | 37.63 | 35.18 |
| AT5G44460.1 | Thale cress | cytosol | 30.11 | 30.94 |
| AT4G20780.1 | Thale cress | cytosol | 30.65 | 29.84 |
| AT2G15680.1 | Thale cress | plastid | 29.03 | 28.88 |
| AT2G43290.1 | Thale cress | extracellular | 33.33 | 28.84 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 31.18 | 27.75 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 28.49 | 27.18 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 29.57 | 25.46 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:839076 | UniProt:A0A178W5H5 | ProteinID:AAF97973.1 | ProteinID:AEE30554.1 |
| ArrayExpress:AT1G24620 | EnsemblPlantsGene:AT1G24620 | RefSeq:AT1G24620 | TAIR:AT1G24620 | RefSeq:AT1G24620-TAIR-G | EnsemblPlants:AT1G24620.1 |
| TAIR:AT1G24620.1 | EMBL:DQ446288 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009628 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016049 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0046872 |
| GO:GO:0048767 | InterPro:IPR002048 | RefSeq:NP_173866.1 | ProteinID:OAP12372.1 | PFAM:PF13499 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF738 | UniProt:Q9FYK2 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A9142 |
| SEG:seg | : | : | : | : | : |
Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
Coordinates
chr1:-:8723627..8724711
Molecular Weight (calculated)
20301.7 Da
IEP (calculated)
4.291
GRAVY (calculated)
-0.595
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.