Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034907.1-P | Field mustard | cytosol | 93.42 | 93.42 |
| CDY39714 | Canola | cytosol | 92.11 | 92.11 |
| Bra032677.1-P | Field mustard | cytosol | 92.11 | 92.11 |
| CDY33702 | Canola | cytosol | 91.45 | 91.45 |
| AT3G07490.1 | Thale cress | cytosol | 73.68 | 73.2 |
| AT1G05990.1 | Thale cress | cytosol | 65.79 | 66.67 |
| AT4G03290.1 | Thale cress | cytosol | 62.5 | 61.69 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 59.87 | 46.67 |
| AT2G43290.1 | Thale cress | extracellular | 62.5 | 44.19 |
| AT5G37770.1 | Thale cress | cytosol | 42.11 | 39.75 |
| AT1G66400.1 | Thale cress | cytosol | 38.16 | 36.94 |
| AT1G73630.1 | Thale cress | cytosol | 37.5 | 34.97 |
| AT1G18210.1 | Thale cress | cytosol | 38.16 | 34.12 |
| AT1G24620.1 | Thale cress | cytosol | 40.13 | 32.8 |
| AT4G20780.1 | Thale cress | cytosol | 38.82 | 30.89 |
| AT5G44460.1 | Thale cress | cytosol | 35.53 | 29.83 |
| AT2G15680.1 | Thale cress | plastid | 35.53 | 28.88 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 31.58 | 22.97 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 27.63 | 19.44 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:826898 | UniProt:A0A178UUX0 | ProteinID:AEE83196.1 | ArrayExpress:AT4G12860 |
| EnsemblPlantsGene:AT4G12860 | RefSeq:AT4G12860 | TAIR:AT4G12860 | RefSeq:AT4G12860-TAIR-G | EnsemblPlants:AT4G12860.1 | TAIR:AT4G12860.1 |
| Unigene:At.51389 | ProteinID:CAB41003.1 | ProteinID:CAB78328.1 | EMBL:DQ056648 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009567 | GO:GO:0046872 |
| InterPro:IPR002048 | RefSeq:NP_193022.1 | ProteinID:OAO97147.1 | PFAM:PF13499 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0007616 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01697 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF662 | UniProt:Q9SU00 | SMART:SM00054 |
| SUPFAM:SSF47473 | Symbol:UNE14 | UniParc:UPI00000A4BD4 | SEG:seg | : | : |
Description
CML2UNE14 [Source:UniProtKB/TrEMBL;Acc:A0A178UUX0]
Coordinates
chr4:-:7538444..7538902
Molecular Weight (calculated)
17183.4 Da
IEP (calculated)
4.174
GRAVY (calculated)
-0.588
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGELSRVF QMFDKNGDGK IAKNELKDFF KSVGIMVPEN EINEMIAKMD VNGDGAMDID EFGSLYQEMV EEKEEEEDMR EAFRVFDQNG DGFITDEELR
101: SVLASMGLKQ GRTLEDCKKM ISKVDVDGDG MVNFKEFKQM MRGGGFAALS SN
101: SVLASMGLKQ GRTLEDCKKM ISKVDVDGDG MVNFKEFKQM MRGGGFAALS SN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.