Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94789 | Canola | cytosol | 88.4 | 87.91 |
| CDY14927 | Canola | cytosol | 87.85 | 87.36 |
| Bra039511.1-P | Field mustard | cytosol | 87.85 | 87.36 |
| CDY49013 | Canola | cytosol | 87.29 | 86.81 |
| Bra033745.1-P | Field mustard | cytosol | 87.29 | 86.81 |
| CDX96968 | Canola | cytosol | 88.4 | 82.9 |
| AT4G20780.1 | Thale cress | cytosol | 79.01 | 74.87 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 62.98 | 59.38 |
| PGSC0003DMT400071219 | Potato | cytosol, plastid | 65.19 | 59.3 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 65.19 | 59.3 |
| GSMUA_Achr8P01570_001 | Banana | cytosol | 57.46 | 56.22 |
| KRH40630 | Soybean | mitochondrion | 55.8 | 55.19 |
| Zm00001d029028_P001 | Maize | plastid | 56.91 | 54.79 |
| Zm00001d047535_P001 | Maize | plastid | 55.8 | 54.01 |
| Os03t0331700-02 | Rice | plasma membrane | 55.8 | 53.16 |
| KXG39446 | Sorghum | plastid | 55.8 | 52.88 |
| EER92319 | Sorghum | cytosol | 54.14 | 52.13 |
| Os08t0144100-01 | Rice | plasma membrane | 56.35 | 52.04 |
| Zm00001d022430_P001 | Maize | cytosol, plastid | 55.8 | 50.5 |
| TraesCS4D01G174400.1 | Wheat | plastid | 52.49 | 50.26 |
| TraesCS2B01G120900.1 | Wheat | plastid | 53.04 | 50.26 |
| TraesCS2A01G103600.1 | Wheat | plastid | 53.04 | 50.26 |
| TraesCS7D01G302700.1 | Wheat | plastid | 54.14 | 50.0 |
| EER97743 | Sorghum | plastid | 54.7 | 49.75 |
| TraesCS4A01G132300.1 | Wheat | plastid | 52.49 | 49.74 |
| TraesCS4B01G172400.1 | Wheat | plastid | 51.93 | 49.74 |
| TraesCS7B01G206200.1 | Wheat | plastid | 54.14 | 49.49 |
| TraesCS7A01G306000.1 | Wheat | plastid | 53.59 | 49.49 |
| Zm00001d007181_P001 | Maize | plastid | 55.25 | 49.26 |
| Os07t0681400-01 | Rice | cytosol | 53.59 | 49.24 |
| TraesCS2D01G103400.1 | Wheat | plastid | 51.93 | 49.21 |
| HORVU7Hr1G072770.1 | Barley | plastid | 53.59 | 48.99 |
| HORVU4Hr1G050990.1 | Barley | plastid | 51.93 | 48.7 |
| TraesCS5D01G348900.1 | Wheat | cytosol | 40.88 | 45.4 |
| TraesCS5A01G343000.1 | Wheat | cytosol, mitochondrion | 40.88 | 45.12 |
| TraesCS5B01G342800.1 | Wheat | cytosol | 40.33 | 45.06 |
| HORVU5Hr1G085800.2 | Barley | cytosol | 41.44 | 42.86 |
| AT1G05990.1 | Thale cress | cytosol | 34.25 | 41.33 |
| Os05t0312600-01 | Rice | cytosol, plastid | 43.09 | 39.59 |
| AT4G03290.1 | Thale cress | cytosol | 32.04 | 37.66 |
| AT3G07490.1 | Thale cress | cytosol | 31.49 | 37.25 |
| AT4G12860.1 | Thale cress | cytosol | 29.83 | 35.53 |
| AT1G66400.1 | Thale cress | cytosol | 30.39 | 35.03 |
| AT5G37770.1 | Thale cress | cytosol | 29.83 | 33.54 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 33.15 | 30.77 |
| AT2G43290.1 | Thale cress | extracellular | 35.91 | 30.23 |
| AT1G24620.1 | Thale cress | cytosol | 30.94 | 30.11 |
| AT2G15680.1 | Thale cress | plastid | 30.39 | 29.41 |
| AT1G73630.1 | Thale cress | cytosol | 25.97 | 28.83 |
| AT1G18210.1 | Thale cress | cytosol | 26.52 | 28.24 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 27.07 | 23.45 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 27.07 | 22.69 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:834473 | ProteinID:AED95111.1 | ArrayExpress:AT5G44460 | EnsemblPlantsGene:AT5G44460 |
| RefSeq:AT5G44460 | TAIR:AT5G44460 | RefSeq:AT5G44460-TAIR-G | EnsemblPlants:AT5G44460.1 | TAIR:AT5G44460.1 | ProteinID:BAB09153.1 |
| EMBL:BT010849 | EMBL:BT020593 | Symbol:CML43 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0008150 | GO:GO:0046686 | GO:GO:0046872 |
| InterPro:IPR002048 | RefSeq:NP_199259.1 | PFAM:PF13405 | PFAM:PF13499 | PO:PO:0000005 | PO:PO:0009005 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR45003 | PANTHER:PTHR45003:SF2 | UniProt:Q9FI19 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI00000A5930 | EMBL:Z26706 | SEG:seg | : | : |
Description
CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
Coordinates
chr5:+:17916993..17918001
Molecular Weight (calculated)
20254.7 Da
IEP (calculated)
4.342
GRAVY (calculated)
-0.388
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.