Factsheet for Bra033745.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49013	Canola	cytosol	98.9	98.9
CDX94789	Canola	cytosol	98.35	98.35
AT5G44460.1	Thale cress	cytosol	86.81	87.29
Bra039511.1-P	Field mustard	cytosol	86.26	86.26
Bra013470.1-P	Field mustard	cytosol	71.98	69.68
Bra020916.1-P	Field mustard	cytosol, plastid	70.33	69.57
Solyc10g074740.1.1	Tomato	cytosol, plastid	64.29	58.79
VIT_08s0056g00290.t01	Wine grape	cytosol, mitochondrion	60.99	57.81
PGSC0003DMT400071219	Potato	cytosol, plastid	63.19	57.79
KRH40630	Soybean	mitochondrion	56.59	56.28
GSMUA_Achr8P01570_001	Banana	cytosol	56.59	55.68
Zm00001d029028_P001	Maize	plastid	54.4	52.66
Zm00001d047535_P001	Maize	plastid	53.85	52.41
KXG39446	Sorghum	plastid	54.95	52.36
Os03t0331700-02	Rice	plasma membrane	54.4	52.11
Os08t0144100-01	Rice	plasma membrane	56.04	52.04
Bra038801.1-P	Field mustard	cytosol	74.18	51.72
EER92319	Sorghum	cytosol	53.3	51.6
Zm00001d022430_P001	Maize	cytosol, plastid	54.95	50.0
EER97743	Sorghum	plastid	54.4	49.75
TraesCS2A01G103600.1	Wheat	plastid	52.2	49.74
TraesCS2B01G120900.1	Wheat	plastid	52.2	49.74
TraesCS4D01G174400.1	Wheat	plastid	51.65	49.74
TraesCS7B01G206200.1	Wheat	plastid	53.85	49.49
Zm00001d007181_P001	Maize	plastid	54.95	49.26
TraesCS4A01G132300.1	Wheat	plastid	51.65	49.21
TraesCS4B01G172400.1	Wheat	plastid	51.1	49.21
TraesCS7D01G302700.1	Wheat	plastid	52.75	48.98
Os07t0681400-01	Rice	cytosol	52.75	48.73
TraesCS2D01G103400.1	Wheat	plastid	51.1	48.69
HORVU7Hr1G072770.1	Barley	plastid	52.75	48.48
TraesCS7A01G306000.1	Wheat	plastid	52.2	48.47
HORVU4Hr1G050990.1	Barley	plastid	51.1	48.19
TraesCS5B01G342800.1	Wheat	cytosol	39.56	44.44
TraesCS5D01G348900.1	Wheat	cytosol	39.56	44.17
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	39.56	43.9
HORVU5Hr1G085800.2	Barley	cytosol	40.66	42.29
Bra040379.1-P	Field mustard	cytosol	31.87	38.93
Bra001254.1-P	Field mustard	cytosol	32.42	38.56
Bra000836.1-P	Field mustard	cytosol	32.42	38.31
Os05t0312600-01	Rice	cytosol, plastid	40.66	37.56
Bra034907.1-P	Field mustard	cytosol	30.22	36.18
Bra032677.1-P	Field mustard	cytosol	29.67	35.53
Bra034870.1-P	Field mustard	cytosol	32.97	35.5
Bra037722.1-P	Field mustard	cytosol	32.97	35.5
Bra019554.1-P	Field mustard	cytosol	32.97	35.5
Bra035972.1-P	Field mustard	cytosol	21.43	35.14
Bra032785.1-P	Field mustard	cytosol	23.63	33.59
Bra025439.1-P	Field mustard	cytosol	29.12	33.12
Bra003376.1-P	Field mustard	vacuole	35.16	31.53
Bra004165.1-P	Field mustard	cytosol	26.37	31.37
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	34.07	31.31
Bra010974.1-P	Field mustard	cytosol	31.32	30.48
Bra015979.1-P	Field mustard	cytosol	26.37	30.19
Bra012497.1-P	Field mustard	cytosol	30.22	29.89
Bra025924.1-P	Field mustard	cytosol	26.92	29.34
Bra016564.1-P	Field mustard	cytosol	27.47	28.74
Bra039845.1-P	Field mustard	plastid	29.12	28.04
Bra016936.1-P	Field mustard	cytosol	15.93	27.62
Bra029821.1-P	Field mustard	plastid	26.92	23.56
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	26.37	22.54

Protein Annotations

EnsemblPlants:Bra033745.1	EnsemblPlants:Bra033745.1-P	EnsemblPlantsGene:Bra033745	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR45003
PANTHER:PTHR45003:SF2	PFAM:PF00036	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000253F642	UniProt:M4EY54	MapMan:35.1	:

Description

AT5G44460 (E=7e-075) | calcium-binding protein, putative

Coordinates

chrA06:-:25296356..25296904

Molecular Weight (calculated)

20531.1 Da

IEP (calculated)

4.159

GRAVY (calculated)

-0.325

Length

182 amino acids

Sequence
(BLAST)

001: MEITINEKKI FSRQSSSFRL RSPSLNALRL QRIFDLFDKN SDGFITVEEL SQALSRLGLD ADISDLKPTI ESYIKPDETG LRFEDFAALH RTLDESFFAG
101: DCECDGSQES DLEEAFKVFD QDGDGFISAV ELQNVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVLVP SS

Best Arabidopsis Sequence Match ( AT5G44460.1 )
(BLAST)

001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S

Arabidopsis Description

CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.