Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 3
- vacuole 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0122600-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20780.1 | Os02t0122600-00 | AT2G46600.1 | 19720824 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G103600.1 | Wheat | plastid | 82.23 | 84.82 |
| TraesCS2B01G120900.1 | Wheat | plastid | 81.73 | 84.29 |
| TraesCS2D01G103400.1 | Wheat | plastid | 81.22 | 83.77 |
| Os08t0144100-01 | Rice | plasma membrane | 81.22 | 81.63 |
| Zm00001d022430_P001 | Maize | cytosol, plastid | 79.7 | 78.5 |
| EER97743 | Sorghum | plastid | 78.68 | 77.89 |
| Zm00001d007181_P001 | Maize | plastid | 79.7 | 77.34 |
| Os03t0331700-02 | Rice | plasma membrane | 72.08 | 74.74 |
| GSMUA_Achr8P01570_001 | Banana | cytosol | 62.44 | 66.49 |
| AT5G44460.1 | Thale cress | cytosol | 49.24 | 53.59 |
| Bra033745.1-P | Field mustard | cytosol | 48.73 | 52.75 |
| CDX94789 | Canola | cytosol | 48.22 | 52.2 |
| CDY49013 | Canola | cytosol | 48.22 | 52.2 |
| CDY14927 | Canola | cytosol | 47.21 | 51.1 |
| Bra039511.1-P | Field mustard | cytosol | 47.21 | 51.1 |
| Bra013470.1-P | Field mustard | cytosol | 48.73 | 51.06 |
| CDX79002 | Canola | cytosol | 48.73 | 51.06 |
| CDX94006 | Canola | cytosol | 47.72 | 50.54 |
| AT4G20780.1 | Thale cress | cytosol | 48.22 | 49.74 |
| CDX82773 | Canola | cytosol | 48.22 | 49.74 |
| CDY31433 | Canola | cytosol, plastid | 46.19 | 49.46 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 47.72 | 48.96 |
| CDX76451 | Canola | cytosol, plastid | 45.69 | 48.91 |
| Bra020916.1-P | Field mustard | cytosol, plastid | 45.69 | 48.91 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 49.24 | 48.74 |
| KRH40630 | Soybean | mitochondrion | 45.18 | 48.63 |
| PGSC0003DMT400071219 | Potato | cytosol, plastid | 48.73 | 48.24 |
| CDX96968 | Canola | cytosol | 47.21 | 48.19 |
| Os05t0312600-01 | Rice | cytosol, plastid | 43.15 | 43.15 |
| Os12t0228800-01 | Rice | cytosol | 32.99 | 38.69 |
| CDX98672 | Canola | cytosol | 47.21 | 36.61 |
| Bra038801.1-P | Field mustard | cytosol | 47.21 | 35.63 |
| Os04t0492800-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 34.01 | 34.18 |
| Os01t0949500-01 | Rice | plasma membrane | 28.93 | 30.81 |
| Os01t0135700-01 | Rice | plasma membrane | 27.41 | 29.83 |
| Os05t0223000-01 | Rice | plasma membrane | 27.92 | 29.1 |
| Os09t0458700-01 | Rice | cytosol, mitochondrion | 25.38 | 27.03 |
| Os05t0380900-01 | Rice | cytosol, mitochondrion | 26.9 | 26.37 |
| Os11t0141400-01 | Rice | cytosol | 24.37 | 25.53 |
| Os06t0172200-02 | Rice | plasma membrane | 29.95 | 25.0 |
| Os01t0949300-01 | Rice | plasma membrane | 23.35 | 22.55 |
| Os12t0138050-00 | Rice | plastid | 24.37 | 20.17 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4344304 | EMBL:AK062850 | ProteinID:BAC80013.1 | ProteinID:BAF22567.1 |
| ProteinID:BAT03247.1 | ProteinID:EAZ41112.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0046872 | InterPro:IPR002048 | EnsemblPlantsGene:Os07g0681400 | EnsemblPlants:Os07t0681400-01 |
| PFAM:PF13405 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR45003 | PANTHER:PTHR45003:SF2 |
| UniProt:Q7XHW4 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00001B3AED | RefSeq:XP_015645027.1 | SEG:seg |
Description
CALMODULIN-LIKE PROTEIN 24Similar to Calcium-binding protein CAST. (Os07t0681400-01)
Coordinates
chr7:+:28889240..28892030
Molecular Weight (calculated)
20923.5 Da
IEP (calculated)
4.180
GRAVY (calculated)
-0.272
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEQQQQQQ QSVAAVRPSL GKAPSPSFRL RNGSLNAVRL RRVFDLFDRN GDGEITVDEL AQALDALGLE ADRAGLAATV GAHVPDGAAG LRFEDFESLH
101: RALGDALFGS LDVPEDGGGG GGGDEEMKEA FKVFDVDGDG FISASELQEV LKKLGMPEAG SLANVREMIC NVDRDSDGRV DFGEFKCMMQ GITVFGA
101: RALGDALFGS LDVPEDGGGG GGGDEEMKEA FKVFDVDGDG FISASELQEV LKKLGMPEAG SLANVREMIC NVDRDSDGRV DFGEFKCMMQ GITVFGA
001: MESNNNEKKK VARQSSSFRL RSPSLNALRL QRIFDLFDKN GDGFITVEEL SQALTRLGLN ADLSDLKSTV ESYIQPGNTG LNFDDFSSLH KTLDDSFFGG
101: ACGGGENEDD PSSAAENESD LAEAFKVFDE NGDGFISARE LQTVLKKLGL PEGGEMERVE KMIVSVDRNQ DGRVDFFEFK NMMRTVVIPS S
101: ACGGGENEDD PSSAAENESD LAEAFKVFDE NGDGFISARE LQTVLKKLGL PEGGEMERVE KMIVSVDRNQ DGRVDFFEFK NMMRTVVIPS S
Arabidopsis Description
CML42Calcium-binding protein CML42 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.