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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033745.1-P Field mustard cytosol 98.35 98.35
CDY49013 Canola cytosol 98.35 98.35
AT5G44460.1 Thale cress cytosol 87.91 88.4
CDY14927 Canola cytosol 86.81 86.81
CDX96968 Canola cytosol 87.36 82.38
CDX94006 Canola cytosol 76.37 74.73
CDX79002 Canola cytosol 72.53 70.21
CDX82773 Canola cytosol 73.63 70.16
CDX76451 Canola cytosol, plastid 70.88 70.11
CDY31433 Canola cytosol, plastid 70.33 69.57
Solyc10g074740.1.1 Tomato cytosol, plastid 64.29 58.79
PGSC0003DMT400071219 Potato cytosol, plastid 63.74 58.29
VIT_08s0056g00290.t01 Wine grape cytosol, mitochondrion 60.99 57.81
KRH40630 Soybean mitochondrion 56.59 56.28
GSMUA_Achr8P01570_001 Banana cytosol 56.04 55.14
CDX98672 Canola cytosol 75.27 53.94
Zm00001d029028_P001 Maize plastid 53.85 52.13
Zm00001d047535_P001 Maize plastid 53.3 51.87
KXG39446 Sorghum plastid 54.4 51.83
Os03t0331700-02 Rice plasma membrane 53.85 51.58
Os08t0144100-01 Rice plasma membrane 55.49 51.53
EER92319 Sorghum cytosol 52.75 51.06
Zm00001d022430_P001 Maize cytosol, plastid 54.4 49.5
EER97743 Sorghum plastid 53.85 49.25
TraesCS2B01G120900.1 Wheat plastid 51.65 49.21
TraesCS2A01G103600.1 Wheat plastid 51.65 49.21
TraesCS4D01G174400.1 Wheat plastid 51.1 49.21
TraesCS7B01G206200.1 Wheat plastid 53.3 48.99
Zm00001d007181_P001 Maize plastid 54.4 48.77
TraesCS4A01G132300.1 Wheat plastid 51.1 48.69
TraesCS4B01G172400.1 Wheat plastid 50.55 48.68
TraesCS7D01G302700.1 Wheat plastid 52.2 48.47
Os07t0681400-01 Rice cytosol 52.2 48.22
TraesCS2D01G103400.1 Wheat plastid 50.55 48.17
HORVU7Hr1G072770.1 Barley plastid 52.2 47.98
TraesCS7A01G306000.1 Wheat plastid 51.65 47.96
HORVU4Hr1G050990.1 Barley plastid 50.55 47.67
TraesCS5B01G342800.1 Wheat cytosol 39.56 44.44
TraesCS5D01G348900.1 Wheat cytosol 39.56 44.17
TraesCS5A01G343000.1 Wheat cytosol, mitochondrion 39.56 43.9
HORVU5Hr1G085800.2 Barley cytosol 40.66 42.29
CDX86544 Canola cytosol 32.42 39.07
CDY63788 Canola cytosol 32.42 39.07
CDX90890 Canola cytosol 32.97 38.96
CDY60818 Canola cytosol 31.87 38.93
CDY07993 Canola cytosol 32.42 38.56
CDX74043 Canola cytosol 32.42 38.56
Os05t0312600-01 Rice cytosol, plastid 40.66 37.56
CDY22119 Canola cytosol 30.77 36.84
CDY21953 Canola cytosol 30.22 36.18
CDY39714 Canola cytosol 29.67 35.53
CDY33702 Canola cytosol 29.12 34.87
CDY17950 Canola cytosol 30.77 33.73
CDX99691 Canola cytosol 29.12 33.54
CDY27652 Canola cytosol 29.12 33.33
CDY55679 Canola cytosol 26.92 32.03
CDX67796 Canola vacuole 35.16 31.53
CDX98375 Canola endoplasmic reticulum 35.16 31.37
CDX96150 Canola cytosol 26.37 31.37
CDY06002 Canola extracellular, vacuole 34.07 31.31
CDY72611 Canola extracellular, vacuole 34.07 31.0
CDX83488 Canola extracellular 36.26 30.84
CDY36129 Canola cytosol 31.32 30.48
CDY30399 Canola extracellular 35.16 30.48
CDY23356 Canola vacuole 35.16 30.33
CDX84967 Canola cytosol 31.32 30.16
CDY03874 Canola cytosol 30.22 29.89
CDY40786 Canola cytosol 30.22 29.89
CDY27574 Canola cytosol 31.32 29.84
CDX96488 Canola cytosol 25.82 29.56
CDX72996 Canola cytosol 25.82 29.56
CDY70127 Canola cytosol 26.37 28.74
CDY37233 Canola plastid 29.67 28.57
CDY66855 Canola plastid 29.67 28.57
CDX83860 Canola cytosol 27.47 28.25
CDX96729 Canola cytosol 26.92 28.16
CDY19196 Canola cytosol 26.92 27.68
CDY44217 Canola endoplasmic reticulum, golgi 36.81 23.76
CDY60169 Canola cytosol, plastid 26.92 23.56
CDY23852 Canola cytosol, mitochondrion, plastid 26.92 23.0
CDY00910 Canola cytosol, plastid 27.47 22.94
CDX79938 Canola cytosol, mitochondrion, plastid 26.37 22.54
CDY06925 Canola cytosol, mitochondrion, plastid 25.82 21.66
CDY14768 Canola cytosol, mitochondrion, plastid 25.27 21.2
CDY24421 Canola endoplasmic reticulum, golgi 31.32 21.03
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1GO:A0A078E2E2EnsemblPlants:CDX94789ProteinID:CDX94789ProteinID:CDX94789.1
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509
EnsemblPlantsGene:GSBRNA2T00158261001InterPro:IPR002048PFAM:PF00036PFAM:PF13499ScanProsite:PS00018PFscan:PS50222
PANTHER:PTHR45003PANTHER:PTHR45003:SF2SMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EB0BA6SEG:seg
Description
BnaC07g17980D
Coordinates
chrLK031884:+:1371271..1371819
Molecular Weight (calculated)
20472.0 Da
IEP (calculated)
4.159
GRAVY (calculated)
-0.307
Length
182 amino acids
Sequence
(BLAST)
001: MEITINEKKI FSRQSSSFRL RSPSLNALRL QRIFDLFDKN SDGFITVEEL SQALSRLGLD ADISDLKPTI ESYIKPDETG LRFEDFAALH KTLDESFFAG
101: DCECDGSPES DLEEAFKVFD QDGDGFISAV ELQNVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVIVP SS
Best Arabidopsis Sequence Match ( AT5G44460.1 )
(BLAST)
001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S
Arabidopsis Description
CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.