Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06002 | Canola | extracellular, vacuole | 97.5 | 98.48 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 87.5 | 89.74 |
| CDX67796 | Canola | vacuole | 90.5 | 89.16 |
| CDX98375 | Canola | endoplasmic reticulum | 90.0 | 88.24 |
| CDY23356 | Canola | vacuole | 76.0 | 72.04 |
| CDY30399 | Canola | extracellular | 75.5 | 71.9 |
| CDY07993 | Canola | cytosol | 53.5 | 69.93 |
| CDX74043 | Canola | cytosol | 53.0 | 69.28 |
| CDY63788 | Canola | cytosol | 52.0 | 68.87 |
| CDX86544 | Canola | cytosol | 52.0 | 68.87 |
| CDX83488 | Canola | extracellular | 73.0 | 68.22 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 51.0 | 68.0 |
| PGSC0003DMT400018016 | Potato | cytosol | 51.0 | 68.0 |
| KRH29625 | Soybean | cytosol | 36.0 | 67.92 |
| CDY60818 | Canola | cytosol | 48.5 | 65.1 |
| CDX90890 | Canola | cytosol | 49.5 | 64.29 |
| CDY22119 | Canola | cytosol | 48.5 | 63.82 |
| CDY21953 | Canola | cytosol | 48.0 | 63.16 |
| CDY33702 | Canola | cytosol | 47.0 | 61.84 |
| CDY39714 | Canola | cytosol | 46.5 | 61.18 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 62.5 | 58.41 |
| CDY17950 | Canola | cytosol | 47.0 | 56.63 |
| Solyc11g044920.1.1 | Tomato | cytosol | 34.0 | 56.2 |
| KRH24625 | Soybean | cytosol | 61.0 | 55.2 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 59.0 | 53.88 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 70.0 | 49.65 |
| CDX96150 | Canola | cytosol | 30.0 | 39.22 |
| CDX99691 | Canola | cytosol | 30.5 | 38.61 |
| CDY55679 | Canola | cytosol | 29.5 | 38.56 |
| CDY27652 | Canola | cytosol | 30.5 | 38.36 |
| CDX94006 | Canola | cytosol | 33.0 | 35.48 |
| CDX94789 | Canola | cytosol | 31.0 | 34.07 |
| CDY49013 | Canola | cytosol | 30.5 | 33.52 |
| CDX96729 | Canola | cytosol | 29.0 | 33.33 |
| CDY14927 | Canola | cytosol | 30.0 | 32.97 |
| CDY70127 | Canola | cytosol | 27.5 | 32.93 |
| CDX72996 | Canola | cytosol | 26.0 | 32.7 |
| CDX96488 | Canola | cytosol | 26.0 | 32.7 |
| CDX79002 | Canola | cytosol | 30.5 | 32.45 |
| CDY31433 | Canola | cytosol, plastid | 29.5 | 32.07 |
| CDX76451 | Canola | cytosol, plastid | 29.5 | 32.07 |
| CDY37233 | Canola | plastid | 30.0 | 31.75 |
| CDY66855 | Canola | plastid | 30.0 | 31.75 |
| CDY19196 | Canola | cytosol | 28.0 | 31.64 |
| CDX82773 | Canola | cytosol | 30.0 | 31.41 |
| CDX96968 | Canola | cytosol | 30.0 | 31.09 |
| CDX83860 | Canola | cytosol | 27.5 | 31.07 |
| CDY36129 | Canola | cytosol | 28.5 | 30.48 |
| CDY03874 | Canola | cytosol | 28.0 | 30.43 |
| CDY40786 | Canola | cytosol | 28.0 | 30.43 |
| CDX84967 | Canola | cytosol | 28.0 | 29.63 |
| CDY27574 | Canola | cytosol | 28.0 | 29.32 |
| CDX98672 | Canola | cytosol | 31.5 | 24.8 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 26.0 | 24.41 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 26.0 | 23.96 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 25.5 | 23.94 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 25.0 | 23.04 |
| CDY60169 | Canola | cytosol, plastid | 23.0 | 22.12 |
| CDY00910 | Canola | cytosol, plastid | 23.0 | 21.1 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 28.5 | 21.03 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078K4C1 | UniProt:A0A078K4C1 | EnsemblPlants:CDY72611 | ProteinID:CDY72611 |
| ProteinID:CDY72611.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00033935001 | InterPro:IPR002048 | PFAM:PF13499 | PRINTS:PR01697 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF662 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM |
| UniParc:UPI0004EACA77 | SEG:seg | : | : | : | : |
Description
BnaCnng78560DBnaCnng78560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K4C1]
Coordinates
chrLK052244:-:543..1145
Molecular Weight (calculated)
22708.1 Da
IEP (calculated)
4.187
GRAVY (calculated)
-0.408
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRVFLLYNL LNSFLLCLVP KKLRVLFPPS WYTDDKITPP SESECSLRTD PVDLKRVFQM FDKNGDGRIT KEELNDSLEN LGIFMPDKDL IQMIQKMDAN
101: GDGCVDINEF ESLYGSIVEE KEEEDMRDAF NVFDQDGDGF ISVEELKSVM ASLGLKQGKT LKCCKEMITQ VDEDGDGRVN YKEFLQMMKS GGFSNSSSSD
101: GDGCVDINEF ESLYGSIVEE KEEEDMRDAF NVFDQDGDGF ISVEELKSVM ASLGLKQGKT LKCCKEMITQ VDEDGDGRVN YKEFLQMMKS GGFSNSSSSD
001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
Arabidopsis Description
CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.