CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029821.1-P	Field mustard	plastid	98.56	98.56
CDY00910	Canola	cytosol, plastid	96.63	92.2
AT3G10190.1	Thale cress	cytosol, mitochondrion	79.33	78.95
CDY23852	Canola	cytosol, mitochondrion, plastid	52.88	51.64
CDX79938	Canola	cytosol, mitochondrion, plastid	52.88	51.64
CDY14768	Canola	cytosol, mitochondrion, plastid	53.37	51.15
CDY06925	Canola	cytosol, mitochondrion, plastid	53.37	51.15
KRH66816	Soybean	plastid	53.85	51.14
KRG95139	Soybean	plastid	53.37	50.92
TraesCS5B01G134200.1	Wheat	cytosol	21.63	50.0
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	51.92	48.65
Solyc10g079420.1.1	Tomato	nucleus, plastid	45.67	46.34
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	45.19	45.85
PGSC0003DMT400076709	Potato	mitochondrion	42.31	41.71
PGSC0003DMT400027581	Potato	cytosol, plastid	42.79	41.2
GSMUA_Achr8P09680_001	Banana	plastid	38.46	39.6
Os11t0141400-01	Rice	cytosol	35.58	39.36
TraesCS5D01G141900.1	Wheat	plastid	34.13	38.8
HORVU5Hr1G043460.1	Barley	plastid	34.13	38.8
EES16521	Sorghum	plastid	37.02	35.98
Solyc04g018110.1.1	Tomato	plastid	41.83	35.95
Zm00001d004972_P001	Maize	plastid	31.25	34.76
KXG27695	Sorghum	plastid	32.69	34.52
TraesCS3A01G488700.1	Wheat	nucleus, plastid	31.73	34.38
TraesCS3D01G484600.1	Wheat	cytosol, plastid	31.73	33.85
TraesCS3B01G536600.1	Wheat	nucleus, plastid	31.73	33.5
Zm00001d042108_P001	Maize	cytosol, plastid	30.77	33.33
Os01t0949300-01	Rice	plasma membrane	32.69	33.33
CDX90890	Canola	cytosol	24.52	33.12
EES02048	Sorghum	plastid	30.29	32.98
CDY60818	Canola	cytosol	23.56	32.89
CDX96150	Canola	cytosol	24.04	32.68
CDX99691	Canola	cytosol	24.52	32.28
CDY21953	Canola	cytosol	23.56	32.24
CDY27652	Canola	cytosol	24.52	32.08
CDY55679	Canola	cytosol	23.56	32.03
CDY22119	Canola	cytosol	23.08	31.58
Os12t0138050-00	Rice	plastid	36.06	31.51
CDY70127	Canola	cytosol	25.0	31.14
CDX72996	Canola	cytosol	23.56	30.82
CDX96488	Canola	cytosol	23.56	30.82
CDX96729	Canola	cytosol	25.48	30.46
CDX86544	Canola	cytosol	21.63	29.8
CDY63788	Canola	cytosol	21.63	29.8
CDY33702	Canola	cytosol	21.63	29.61
CDY39714	Canola	cytosol	21.63	29.61
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	40.87	29.51
CDX74043	Canola	cytosol	21.63	29.41
CDY07993	Canola	cytosol	21.63	29.41
CDY40786	Canola	cytosol	25.96	29.35
CDY03874	Canola	cytosol	25.96	29.35
CDX84967	Canola	cytosol	26.44	29.1
CDY19196	Canola	cytosol	24.52	28.81
CDX83860	Canola	cytosol	24.52	28.81
CDY27574	Canola	cytosol	26.44	28.8
CDY66855	Canola	plastid	25.96	28.57
CDY37233	Canola	plastid	25.96	28.57
CDY36129	Canola	cytosol	25.48	28.34
CDY17950	Canola	cytosol	22.6	28.31
CDY49013	Canola	cytosol	23.56	26.92
CDX94789	Canola	cytosol	23.56	26.92
CDY14927	Canola	cytosol	23.56	26.92
CDX96968	Canola	cytosol	23.56	25.39
HORVU3Hr1G106950.3	Barley	cytosol	31.73	24.44
CDY30399	Canola	extracellular	24.52	24.29
CDX94006	Canola	cytosol	21.63	24.19
CDY23356	Canola	vacuole	24.52	24.17
CDX83488	Canola	extracellular	24.52	23.83
CDX67796	Canola	vacuole	23.08	23.65
CDX82773	Canola	cytosol	21.63	23.56
CDX98375	Canola	endoplasmic reticulum	23.08	23.53
CDX79002	Canola	cytosol	21.15	23.4
CDX76451	Canola	cytosol, plastid	20.67	23.37
CDY31433	Canola	cytosol, plastid	20.67	23.37
CDY06002	Canola	extracellular, vacuole	22.12	23.23
CDY72611	Canola	extracellular, vacuole	22.12	23.0
CDY24421	Canola	endoplasmic reticulum, golgi	25.48	19.56
CDY44217	Canola	endoplasmic reticulum, golgi	23.56	17.38
CDX98672	Canola	cytosol	21.15	17.32

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078J2W0	UniProt:A0A078J2W0	EnsemblPlants:CDY60169	ProteinID:CDY60169
ProteinID:CDY60169.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00028261001	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10891	PANTHER:PTHR10891:SF739	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EDB6CE	SEG:seg

Description

BnaAnng16630DBnaAnng16630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2W0]

Coordinates

chrLK033849:+:43048..43674

Molecular Weight (calculated)

22975.6 Da

IEP (calculated)

4.261

GRAVY (calculated)

-0.487

Length

208 amino acids

Sequence
(BLAST)

001: MKFAKLNPKR LFRSKDRSTV SKSTASSFSS GAADECNNHS PAVTGGSVTP TSILPEVSAV HSPYSYVEIL QAFKLIDRDN DGAVSRHDLE SLLTRLGPDP
101: PTEEEIDVML KEVNCDGDGT VRLEELASRC VDDDQSRGGS DELKETFEFF DADRDGKISA EELLRVFSAI GDERCTLEEC ERMIAAVDDD GNGFVCFTEF
201: SRMMDLQR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.