Factsheet for HORVU5Hr1G043460.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41410.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT2G41410.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT2G41410.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G141900.1	Wheat	plastid	89.62	89.62
TraesCS5B01G134200.1	Wheat	cytosol	43.17	87.78
Os11t0141400-01	Rice	cytosol	63.93	62.23
KXG27695	Sorghum	plastid	65.57	60.91
Zm00001d004972_P001	Maize	plastid	60.66	59.36
Os12t0138050-00	Rice	plastid	65.03	50.0
Bra016936.1-P	Field mustard	cytosol	24.04	41.9
HORVU5Hr1G068490.1	Barley	cytosol	19.13	40.7
Solyc10g079420.1.1	Tomato	nucleus, plastid	40.44	36.1
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	39.89	35.61
AT3G10190.1	Thale cress	cytosol, mitochondrion	40.44	35.41
CDY60169	Canola	cytosol, plastid	38.8	34.13
Bra029821.1-P	Field mustard	plastid	38.8	34.13
CDY23852	Canola	cytosol, mitochondrion, plastid	38.25	32.86
CDY00910	Canola	cytosol, plastid	38.8	32.57
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	39.34	32.43
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	37.7	32.39
CDX79938	Canola	cytosol, mitochondrion, plastid	37.7	32.39
PGSC0003DMT400076709	Potato	mitochondrion	37.16	32.23
KRG95139	Soybean	plastid	38.25	32.11
KRH66816	Soybean	plastid	37.7	31.51
CDY06925	Canola	cytosol, mitochondrion, plastid	36.61	30.88
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	35.52	30.09
CDY14768	Canola	cytosol, mitochondrion, plastid	35.52	29.95
HORVU4Hr1G081250.1	Barley	cytosol	9.84	29.51
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	45.9	29.17
HORVU1Hr1G057410.1	Barley	mitochondrion	30.05	29.1
HORVU3Hr1G107090.2	Barley	cytosol, plastid	30.05	28.8
PGSC0003DMT400027581	Potato	cytosol, plastid	33.88	28.7
HORVU3Hr1G106950.3	Barley	cytosol	40.98	27.78
HORVU5Hr1G085800.2	Barley	cytosol	26.23	27.43
Solyc04g018110.1.1	Tomato	plastid	35.52	26.86
HORVU3Hr1G007420.1	Barley	cytosol	26.78	26.34
HORVU7Hr1G072770.1	Barley	plastid	27.32	25.25
HORVU4Hr1G050990.1	Barley	plastid	25.68	24.35
HORVU1Hr1G074240.1	Barley	cytosol, plastid	18.03	22.0
HORVU6Hr1G076690.1	Barley	cytosol	18.03	22.0
HORVU4Hr1G032570.1	Barley	cytosol, plastid	18.03	22.0
HORVU1Hr1G029850.1	Barley	cytosol	27.32	21.93
HORVU7Hr1G101640.1	Barley	cytosol, plastid	18.03	21.71
HORVU7Hr1G008910.2	Barley	cytosol	24.59	21.03
HORVU7Hr1G029640.1	Barley	cytosol, plastid	18.03	21.02
HORVU5Hr1G077930.1	Barley	cytosol	16.94	20.81
HORVU5Hr1G117570.1	Barley	cytosol	14.75	20.77
HORVU6Hr1G034200.1	Barley	cytosol, plastid	18.03	20.75
HORVU1Hr1G023720.1	Barley	cytosol, plastid	18.03	20.62
HORVU5Hr1G018360.1	Barley	cytosol, plastid	16.94	20.53
HORVU4Hr1G085560.1	Barley	cytosol, plastid	19.13	19.77
HORVU7Hr1G027770.3	Barley	endoplasmic reticulum	24.59	19.65
HORVU0Hr1G031990.1	Barley	cytosol, plastid	16.94	19.62
HORVU5Hr1G073590.1	Barley	cytosol, plastid	9.84	9.89

Protein Annotations

EMBL:AK361300	EnsemblPlants:HORVU5Hr1G043460.1	EnsemblPlantsGene:HORVU5Hr1G043460	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF739	PFAM:PF13202	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI00020061C6	UniProt:F2DBN6	MapMan:35.1	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DBN6]

Coordinates

chrchr5H:+:335387588..335388635

Molecular Weight (calculated)

19098.2 Da

IEP (calculated)

4.248

GRAVY (calculated)

-0.268

Length

183 amino acids

Sequence
(BLAST)

001: MKFFGSSTSK KENKGKKRSK RSGNSGSFAS TASSSASDEQ SVTTPSSVPP SSSGTAAPSG CGTTKKPAMV AVTRLELEVA LRTVVSTEEE LAVMLAEAEA
101: GLALDGVEDG EAADEGELRD TFAVFDADGD GRISAEELRA VLATLGDERC SVEDCRRMIG GVDSDGDGFV CFDEFTRMMM LAL

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.