Factsheet for TraesCS5D01G141900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41410.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT2G41410.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G134200.1	Wheat	cytosol	48.09	97.78
HORVU5Hr1G043460.1	Barley	plastid	89.62	89.62
Os11t0141400-01	Rice	cytosol	67.76	65.96
KXG27695	Sorghum	plastid	67.76	62.94
Zm00001d004972_P001	Maize	plastid	62.84	61.5
Os12t0138050-00	Rice	plastid	68.85	52.94
Bra016936.1-P	Field mustard	cytosol	24.04	41.9
TraesCS3D01G484600.1	Wheat	cytosol, plastid	43.17	40.51
Solyc10g079420.1.1	Tomato	nucleus, plastid	39.89	35.61
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	39.34	35.12
AT3G10190.1	Thale cress	cytosol, mitochondrion	39.89	34.93
CDY60169	Canola	cytosol, plastid	38.8	34.13
Bra029821.1-P	Field mustard	plastid	38.8	34.13
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	39.89	32.88
CDY23852	Canola	cytosol, mitochondrion, plastid	38.25	32.86
CDY00910	Canola	cytosol, plastid	38.8	32.57
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	37.7	32.39
CDX79938	Canola	cytosol, mitochondrion, plastid	37.7	32.39
PGSC0003DMT400076709	Potato	mitochondrion	37.16	32.23
KRG95139	Soybean	plastid	38.25	32.11
KRH66816	Soybean	plastid	38.25	31.96
CDY06925	Canola	cytosol, mitochondrion, plastid	37.16	31.34
CDY14768	Canola	cytosol, mitochondrion, plastid	36.07	30.41
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	35.52	30.09
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	30.05	29.57
TraesCS3D01G483200.1	Wheat	cytosol, plastid	30.6	29.32
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	45.9	29.17
PGSC0003DMT400027581	Potato	cytosol, plastid	34.43	29.17
TraesCS1D01G239000.1	Wheat	mitochondrion	30.05	29.1
TraesCS1D01G125800.1	Wheat	cytosol	27.32	29.07
TraesCS3D01G041500.1	Wheat	cytosol	28.42	28.11
TraesCS7D01G045800.1	Wheat	cytosol	26.23	27.75
TraesCS5D01G348900.1	Wheat	cytosol	24.04	26.99
Solyc04g018110.1.1	Tomato	plastid	35.52	26.86
TraesCS2D01G347500.1	Wheat	plastid	32.24	26.82
TraesCS5D01G246000.1	Wheat	mitochondrion	25.68	25.68
TraesCS2D01G103400.1	Wheat	plastid	26.23	25.13
TraesCS7D01G302700.1	Wheat	plastid	26.78	25.0
TraesCS4D01G174400.1	Wheat	plastid	25.68	24.87
TraesCS7D01G132700.1	Wheat	endoplasmic reticulum	28.42	22.51
TraesCS3D01G041400.1	Wheat	cytosol, plastid	27.32	21.01

Protein Annotations

EnsemblPlants:TraesCS5D01G141900.1	EnsemblPlantsGene:TraesCS5D01G141900	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF739
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
TIGR:cd00051	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:227736852..227737403

Molecular Weight (calculated)

19068.4 Da

IEP (calculated)

4.451

GRAVY (calculated)

-0.185

Length

183 amino acids

Sequence
(BLAST)

001: MKFFGSSTSK KENKGKKRSK RSGNGGSFAS TASSSASDDQ SVTTLRSVLP SSSGPAVPSG SGTTKKPALV AVTRLELEVA LRTVVSTEEE LAAMLAEAEA
101: GLALEGIVAA EAADEGELRD TFAVFDADGD GRISAEELRA VLASLGDERC SVEDCRRMIG GVDTDGDGFV CFNEFTRMMM LAP

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.