Factsheet for TraesCS2D01G347500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G367500.1	Wheat	plastid	95.45	98.13
TraesCS2A01G349100.1	Wheat	plastid	91.82	93.95
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	66.82	75.0
GSMUA_Achr8P28890_001	Banana	cytosol	48.64	71.33
GSMUA_Achr3P16870_001	Banana	cytosol	46.36	67.55
GSMUA_Achr2P05840_001	Banana	cytosol	45.45	66.67
EES11048	Sorghum	plastid	70.91	65.55
GSMUA_Achr1P13420_001	Banana	cytosol	44.55	65.33
GSMUA_Achr6P28770_001	Banana	cytosol	44.55	65.33
Bra040379.1-P	Field mustard	cytosol	43.64	64.43
CDY60818	Canola	cytosol	43.64	64.43
AT3G07490.1	Thale cress	cytosol	44.55	64.05
Zm00001d003197_P001	Maize	plastid	64.55	63.96
VIT_07s0289g00040.t01	Wine grape	cytosol	44.09	62.99
VIT_07s0141g00300.t01	Wine grape	cytosol	44.09	62.99
Bra001254.1-P	Field mustard	cytosol	43.18	62.09
CDY07993	Canola	cytosol	43.18	62.09
KRG95097	Soybean	cytosol	42.73	61.84
Solyc06g083000.1.1	Tomato	cytosol	41.82	61.74
CDX74043	Canola	cytosol	42.73	61.44
KRH66763	Soybean	cytosol	42.27	61.18
PGSC0003DMT400071189	Potato	cytosol	41.36	61.07
Solyc09g055880.1.1	Tomato	cytosol	40.91	60.0
TraesCS7D01G045800.1	Wheat	cytosol	44.09	56.07
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	50.0	49.77
TraesCS4D01G174400.1	Wheat	plastid	34.09	39.68
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	32.73	38.71
TraesCS3D01G483200.1	Wheat	cytosol, plastid	32.73	37.7
TraesCS2D01G103400.1	Wheat	plastid	32.27	37.17
TraesCS1D01G239000.1	Wheat	mitochondrion	31.82	37.04
TraesCS5D01G348900.1	Wheat	cytosol	27.27	36.81
TraesCS7D01G132700.1	Wheat	endoplasmic reticulum	38.64	36.8
TraesCS1D01G125800.1	Wheat	cytosol	28.18	36.05
TraesCS7D01G302700.1	Wheat	plastid	30.91	34.69
TraesCS3D01G041500.1	Wheat	cytosol	28.64	34.05
TraesCS5D01G141900.1	Wheat	plastid	26.82	32.24
TraesCS5D01G246000.1	Wheat	mitochondrion	25.91	31.15
TraesCS3D01G484600.1	Wheat	cytosol, plastid	24.55	27.69
TraesCS3D01G041400.1	Wheat	cytosol, plastid	28.18	26.05

Protein Annotations

EnsemblPlants:TraesCS2D01G347500.1	EnsemblPlantsGene:TraesCS2D01G347500	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF642
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
TIGR:cd00051	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:445706523..445707185

Molecular Weight (calculated)

23115.1 Da

IEP (calculated)

4.172

GRAVY (calculated)

-0.340

Length

220 amino acids

Sequence
(BLAST)

001: MPPSGILSYI PTSLSSILPV RGCGAAPLPS PSPSPPTPPA SPAPSKMSPS VKAADRAELA RVFELFDRNG DGRITREELE DSLGKLGIPV PGDELAAMIA
101: RIDADGDGCV DVEEFGELYR TIMSTGGGGG QKGSSGEEAA AEEDEDEDMR EAFRVFDANG DGFITVDELS AVLASLGLKQ GRSAEECRRM IGQVDRDGDG
201: RVDFHEFRQM MRGGGLAALA

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.