CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66763	Soybean	cytosol	94.74	94.74
VIT_07s0289g00040.t01	Wine grape	cytosol	79.61	78.57
VIT_07s0141g00300.t01	Wine grape	cytosol	79.61	78.57
AT3G07490.1	Thale cress	cytosol	76.32	75.82
GSMUA_Achr1P13420_001	Banana	cytosol	74.34	75.33
GSMUA_Achr2P05840_001	Banana	cytosol	74.34	75.33
PGSC0003DMT400071189	Potato	cytosol	73.68	75.17
Bra040379.1-P	Field mustard	cytosol	73.03	74.5
CDY60818	Canola	cytosol	73.03	74.5
Solyc06g083000.1.1	Tomato	cytosol	72.37	73.83
GSMUA_Achr8P28890_001	Banana	cytosol	72.37	73.33
Bra001254.1-P	Field mustard	cytosol	73.68	73.2
CDY07993	Canola	cytosol	73.68	73.2
CDX74043	Canola	cytosol	73.03	72.55
KRH29625	Soybean	cytosol	49.34	70.75
GSMUA_Achr3P16870_001	Banana	cytosol	69.08	69.54
GSMUA_Achr6P28770_001	Banana	cytosol	66.45	67.33
Zm00001d023992_P001	Maize	cytosol	65.13	62.26
KRH23209	Soybean	cytosol, mitochondrion	75.0	61.96
OQU78964	Sorghum	cytosol	64.47	59.39
TraesCS7A01G050500.1	Wheat	cytosol	60.53	56.44
Os12t0228800-01	Rice	cytosol	61.18	55.36
KRH10131	Soybean	endoplasmic reticulum	75.66	54.5
TraesCS4A01G436700.1	Wheat	cytosol	61.18	53.45
TraesCS7D01G045800.1	Wheat	cytosol	60.53	53.18
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	74.34	51.13
KRH24625	Soybean	cytosol	72.37	49.77
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	63.82	49.49
HORVU7Hr1G008910.2	Barley	cytosol	65.13	46.26
TraesCS2B01G367500.1	Wheat	plastid	61.84	43.93
TraesCS2A01G349100.1	Wheat	plastid	61.18	43.26
TraesCS2D01G347500.1	Wheat	plastid	61.84	42.73
KRH17370	Soybean	cytosol	37.5	40.43
KRH75577	Soybean	cytosol	39.47	39.47
KRH73006	Soybean	cytosol	36.18	39.01
Zm00001d003197_P001	Maize	plastid	56.58	38.74
KRH30955	Soybean	cytosol	34.21	37.96
KRG97926	Soybean	cytosol	34.21	37.41
EES11048	Sorghum	plastid	58.55	37.4
KRH37459	Soybean	cytosol	24.34	36.27
KRH16247	Soybean	cytosol	29.61	34.35
KRH24162	Soybean	cytosol	31.58	34.29
KRH03663	Soybean	endoplasmic reticulum, extracellular	50.66	33.62
KRH49632	Soybean	cytosol, mitochondrion, plastid	40.13	33.52
KRH60410	Soybean	cytosol, plastid	40.79	32.98
KRH20147	Soybean	extracellular	48.68	32.31
KRH40630	Soybean	mitochondrion	38.16	31.69
KRH48613	Soybean	cytosol	36.84	31.28
KRH41828	Soybean	cytosol	36.84	31.11
KRH28478	Soybean	cytosol, plastid	37.5	30.48
KRH02767	Soybean	cytosol	30.26	30.26
KRH71148	Soybean	cytosol	36.18	29.73
KRH50269	Soybean	mitochondrion	36.18	29.73
KRH15405	Soybean	cytosol	27.63	29.17
KRH57807	Soybean	plastid	36.18	29.1
KRH04628	Soybean	plastid	36.18	28.95
KRH76994	Soybean	cytosol, plastid	35.53	28.88
KRH76288	Soybean	plastid	36.84	26.17
KRH65252	Soybean	plastid	36.84	26.17
KRH00581	Soybean	plastid	38.16	26.01
KRH60530	Soybean	plastid	34.87	24.54
KRG95139	Soybean	plastid	30.92	21.56
KRH66816	Soybean	plastid	30.26	21.0

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100806637	MapMan:35.1	EMBL:ACUP02012078	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_19G129800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1N8R6
InterPro:IPR002048	EnsemblPlants:KRG95097	ProteinID:KRG95097	ProteinID:KRG95097.1	PFAM:PF13499	PRINTS:PR01697
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF662	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000233E751	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:38933954..38934743

Molecular Weight (calculated)

16959.0 Da

IEP (calculated)

4.008

GRAVY (calculated)

-0.472

Length

152 amino acids

Sequence
(BLAST)

001: MDQGELARVF QMFDRNGDGR ITRKELSDSL KNLGITISEQ DLTQMIEKID VNGDGFVDIN EFGELYQTIM DEKDEEEDMK EAFNVFDQNG DGFITGEELS
101: AVLCSLGLKH GKTIEDCESM IKKVDVDGDG MVDYKEFKQM MKAGGFAAAS LS

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.