Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G045800.1 | Wheat | cytosol | 98.77 | 93.06 |
| TraesCS4A01G436700.1 | Wheat | cytosol | 95.71 | 89.66 |
| OQU78964 | Sorghum | cytosol | 76.69 | 75.76 |
| Zm00001d023992_P001 | Maize | cytosol | 73.62 | 75.47 |
| GSMUA_Achr2P05840_001 | Banana | cytosol | 62.58 | 68.0 |
| Solyc06g083000.1.1 | Tomato | cytosol | 61.96 | 67.79 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 88.96 | 67.76 |
| GSMUA_Achr8P28890_001 | Banana | cytosol | 61.96 | 67.33 |
| Os12t0228800-01 | Rice | cytosol | 69.33 | 67.26 |
| GSMUA_Achr1P13420_001 | Banana | cytosol | 61.35 | 66.67 |
| PGSC0003DMT400071189 | Potato | cytosol | 60.12 | 65.77 |
| CDY60818 | Canola | cytosol | 59.51 | 65.1 |
| Bra040379.1-P | Field mustard | cytosol | 59.51 | 65.1 |
| GSMUA_Achr6P28770_001 | Banana | cytosol | 59.51 | 64.67 |
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 60.74 | 64.29 |
| VIT_07s0141g00300.t01 | Wine grape | cytosol | 60.74 | 64.29 |
| AT3G07490.1 | Thale cress | cytosol | 59.51 | 63.4 |
| GSMUA_Achr3P16870_001 | Banana | cytosol | 58.28 | 62.91 |
| Bra001254.1-P | Field mustard | cytosol | 57.67 | 61.44 |
| CDY07993 | Canola | cytosol | 57.67 | 61.44 |
| Solyc09g055880.1.1 | Tomato | cytosol | 56.44 | 61.33 |
| CDX74043 | Canola | cytosol | 57.06 | 60.78 |
| KRG95097 | Soybean | cytosol | 56.44 | 60.53 |
| KRH66763 | Soybean | cytosol | 55.21 | 59.21 |
| GSMUA_Achr9P07990_001 | Banana | endoplasmic reticulum, golgi, plastid | 65.03 | 47.96 |
| TraesCS2A01G349100.1 | Wheat | plastid | 57.06 | 43.26 |
| TraesCS2A01G103600.1 | Wheat | plastid | 41.1 | 35.08 |
| TraesCS5A01G343000.1 | Wheat | cytosol, mitochondrion | 34.97 | 34.76 |
| TraesCS7A01G306000.1 | Wheat | plastid | 41.1 | 34.18 |
| TraesCS3A01G488400.1 | Wheat | cytosol, plastid | 39.26 | 33.51 |
| TraesCS1A01G238800.1 | Wheat | mitochondrion | 38.65 | 33.33 |
| TraesCS4A01G132300.1 | Wheat | plastid | 38.65 | 32.98 |
| TraesCS1A01G134000.1 | Wheat | cytosol | 33.74 | 31.98 |
| TraesCS3A01G038300.1 | Wheat | cytosol | 33.74 | 29.57 |
| TraesCS5A01G238900.1 | Wheat | mitochondrion | 31.29 | 27.87 |
| TraesCS3A01G488700.1 | Wheat | nucleus, plastid | 30.06 | 25.52 |
| TraesCS7A01G133200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.63 | 22.49 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G050500.1 | EnsemblPlantsGene:TraesCS7A01G050500 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:23691478..23692098
Molecular Weight (calculated)
18110.2 Da
IEP (calculated)
4.039
GRAVY (calculated)
-0.671
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRVDESEL RKVFQMFDKN GDGQITKKEL GELLKNLGIY IADDEMDATM AKIDTNGDGC IDVEEFGLLY RSILDEGDGP NGGNMGDEEE EMREAFGVFD
101: QNGDGYITIE ELRSVLASLG LKQGRTVEEC RQMINKVDAN GDGRVDFKEF SQMMRGGAAN RED
101: QNGDGYITIE ELRSVLASLG LKQGRTVEEC RQMINKVDAN GDGRVDFKEF SQMMRGGAAN RED
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.