Factsheet for Bra001254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07993	Canola	cytosol	100.0	100.0
CDX74043	Canola	cytosol	99.35	99.35
AT3G07490.1	Thale cress	cytosol	93.46	93.46
Bra040379.1-P	Field mustard	cytosol	84.97	87.25
VIT_07s0289g00040.t01	Wine grape	cytosol	83.66	83.12
VIT_07s0141g00300.t01	Wine grape	cytosol	83.66	83.12
GSMUA_Achr8P28890_001	Banana	cytosol	75.82	77.33
GSMUA_Achr2P05840_001	Banana	cytosol	74.51	76.0
PGSC0003DMT400071189	Potato	cytosol	73.86	75.84
GSMUA_Achr1P13420_001	Banana	cytosol	73.86	75.33
Solyc06g083000.1.1	Tomato	cytosol	73.2	75.17
KRG95097	Soybean	cytosol	73.2	73.68
Solyc09g055880.1.1	Tomato	cytosol	71.9	73.33
KRH66763	Soybean	cytosol	72.55	73.03
Bra034907.1-P	Field mustard	cytosol	71.9	72.37
GSMUA_Achr3P16870_001	Banana	cytosol	71.24	72.19
Bra032677.1-P	Field mustard	cytosol	71.24	71.71
GSMUA_Achr6P28770_001	Banana	cytosol	67.97	69.33
Bra035972.1-P	Field mustard	cytosol	49.67	68.47
Bra000836.1-P	Field mustard	cytosol	67.32	66.88
Zm00001d023992_P001	Maize	cytosol	67.32	64.78
Bra034870.1-P	Field mustard	cytosol	69.93	63.31
Bra037722.1-P	Field mustard	cytosol	69.93	63.31
Bra019554.1-P	Field mustard	cytosol	69.93	63.31
OQU78964	Sorghum	cytosol	67.97	63.03
TraesCS7A01G050500.1	Wheat	cytosol	61.44	57.67
Os12t0228800-01	Rice	cytosol	62.75	57.14
TraesCS7D01G045800.1	Wheat	cytosol	61.44	54.34
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	69.93	54.04
TraesCS4A01G436700.1	Wheat	cytosol	59.48	52.3
Bra003376.1-P	Field mustard	vacuole	69.28	52.22
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	73.86	51.13
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	63.4	49.49
HORVU7Hr1G008910.2	Barley	cytosol	65.36	46.73
TraesCS2B01G367500.1	Wheat	plastid	62.09	44.39
TraesCS2A01G349100.1	Wheat	plastid	61.44	43.72
TraesCS2D01G347500.1	Wheat	plastid	62.09	43.18
Bra004165.1-P	Field mustard	cytosol	39.22	39.22
Zm00001d003197_P001	Maize	plastid	54.9	37.84
Bra032785.1-P	Field mustard	cytosol	31.37	37.5
EES11048	Sorghum	plastid	57.52	36.97
Bra025439.1-P	Field mustard	cytosol	37.91	36.25
Bra016936.1-P	Field mustard	cytosol	24.18	35.24
Bra015979.1-P	Field mustard	cytosol	35.95	34.59
Bra010974.1-P	Field mustard	cytosol	40.52	33.16
Bra025924.1-P	Field mustard	cytosol	35.95	32.93
Bra033745.1-P	Field mustard	cytosol	38.56	32.42
Bra016564.1-P	Field mustard	cytosol	36.6	32.18
Bra012497.1-P	Field mustard	cytosol	38.56	32.07
Bra020916.1-P	Field mustard	cytosol, plastid	37.91	31.52
Bra013470.1-P	Field mustard	cytosol	38.56	31.38
Bra039511.1-P	Field mustard	cytosol	37.25	31.32
Bra039845.1-P	Field mustard	plastid	37.25	30.16
Bra038801.1-P	Field mustard	cytosol	41.18	24.14
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	32.03	23.0
Bra029821.1-P	Field mustard	plastid	30.07	22.12

Protein Annotations

EnsemblPlants:Bra001254.1	EnsemblPlants:Bra001254.1-P	EnsemblPlantsGene:Bra001254	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00025404C6	UniProt:M4CAM5	MapMan:35.1	:

Description

AT3G07490 (E=2e-071) AGD11 | AGD11 (ARF-GAP domain 11); calcium ion binding

Coordinates

chrA03:+:15537576..15538037

Molecular Weight (calculated)

17388.6 Da

IEP (calculated)

4.041

GRAVY (calculated)

-0.592

Length

153 amino acids

Sequence
(BLAST)

001: MDQAELSRIF QMFDRNGDGK ITKQELNDSL ENVGIYMPDK DLVQMIEKID LNGDGYVDIE EFGGLYETIM EERDEEEDMR EAFNVFDQNR DGFITVEELK
101: SVLASLGLKQ GRTLEDCKKM IGKVDADGDG MVNYKEFKQM MKGGGFAALE SNL

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.