Factsheet for Bra007450.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06002	Canola	extracellular, vacuole	98.99	98.99
AT3G59440.1	Thale cress	endoplasmic reticulum, extracellular	87.88	89.23
Bra003376.1-P	Field mustard	vacuole	90.4	88.18
Bra035972.1-P	Field mustard	cytosol	43.43	77.48
Bra037722.1-P	Field mustard	cytosol	63.64	74.56
Bra019554.1-P	Field mustard	cytosol	63.64	74.56
Bra034870.1-P	Field mustard	cytosol	63.64	74.56
Bra001254.1-P	Field mustard	cytosol	54.04	69.93
Solyc05g050750.1.1	Tomato	cytosol, unclear	51.52	68.0
PGSC0003DMT400018016	Potato	cytosol	51.52	68.0
KRH29625	Soybean	cytosol	36.36	67.92
Bra040379.1-P	Field mustard	cytosol	48.99	65.1
Bra000836.1-P	Field mustard	cytosol	50.0	64.29
Bra032677.1-P	Field mustard	cytosol	46.46	60.53
Bra034907.1-P	Field mustard	cytosol	45.96	59.87
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	63.13	58.41
Solyc11g044920.1.1	Tomato	cytosol	33.84	55.37
KRH24625	Soybean	cytosol	61.62	55.2
PGSC0003DMT400069195	Potato	golgi, plastid	59.6	53.88
Bra004165.1-P	Field mustard	cytosol	30.81	39.87
Bra025439.1-P	Field mustard	cytosol	30.81	38.12
Bra016936.1-P	Field mustard	cytosol	18.69	35.24
Bra032785.1-P	Field mustard	cytosol	22.22	34.38
Bra033745.1-P	Field mustard	cytosol	31.31	34.07
Bra016564.1-P	Field mustard	cytosol	29.29	33.33
Bra039511.1-P	Field mustard	cytosol	30.3	32.97
Bra025924.1-P	Field mustard	cytosol	27.78	32.93
Bra015979.1-P	Field mustard	cytosol	25.76	32.08
Bra013470.1-P	Field mustard	cytosol	30.3	31.91
Bra039845.1-P	Field mustard	plastid	30.3	31.75
Bra020916.1-P	Field mustard	cytosol, plastid	29.29	31.52
Bra010974.1-P	Field mustard	cytosol	28.79	30.48
Bra012497.1-P	Field mustard	cytosol	28.28	30.43
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	26.26	24.41
Bra038801.1-P	Field mustard	cytosol	31.31	23.75
Bra029821.1-P	Field mustard	plastid	23.74	22.6

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EnsemblPlantsGene:Bra007450	EnsemblPlants:Bra007450.1	EnsemblPlants:Bra007450.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
UniProt:M4CTA7	PFAM:PF13499	PRINTS:PR01697	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF662	SMART:SM00054	SUPFAM:SSF47473	SignalP:SignalP-noTM	UniParc:UPI0002542ECA	SEG:seg

Description

AT3G59440 (E=5e-087) | calcium-binding protein, putative

Coordinates

chrA09:+:29270184..29270780

Molecular Weight (calculated)

22545.0 Da

IEP (calculated)

4.358

GRAVY (calculated)

-0.388

Length

198 amino acids

Sequence
(BLAST)

001: MVRVFLLYNL LNSFLLCLVP KKLRVLFPPS WYTDDKITPP SESECSLRTD PVDLKRVFQM FDKNGDGRIT KEELNDSLEN LGIFMPDKDL IQMIRKMDAN
101: GDGCVDINEF ESLYGSIVEE KEEEDMRDAF NVFDQDGDGF ISVEELKSVM ASLGLKQGKT LKCCKAMITQ VDEDGDGRVN YKEFLQMMKS GGFSNRSS

Best Arabidopsis Sequence Match ( AT3G59440.1 )
(BLAST)

001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS

Arabidopsis Description

CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.