Factsheet for Bra019554.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034870.1-P	Field mustard	cytosol	100.0	100.0
Bra035972.1-P	Field mustard	cytosol	65.68	100.0
Bra037722.1-P	Field mustard	cytosol	100.0	100.0
CDY30399	Canola	extracellular	98.22	79.05
KRH29625	Soybean	cytosol	44.38	70.75
AT2G43290.1	Thale cress	extracellular	89.35	70.23
Bra000836.1-P	Field mustard	cytosol	63.91	70.13
Bra001254.1-P	Field mustard	cytosol	63.31	69.93
Bra040379.1-P	Field mustard	cytosol	58.58	66.44
PGSC0003DMT400018016	Potato	cytosol	57.4	64.67
Solyc05g050750.1.1	Tomato	cytosol, unclear	57.4	64.67
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	74.56	63.64
Solyc11g044920.1.1	Tomato	cytosol	45.56	63.64
Bra003376.1-P	Field mustard	vacuole	75.15	62.56
Bra032677.1-P	Field mustard	cytosol	55.62	61.84
Bra034907.1-P	Field mustard	cytosol	54.44	60.53
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	65.68	51.87
PGSC0003DMT400069195	Potato	golgi, plastid	64.5	49.77
KRH24625	Soybean	cytosol	63.91	48.87
Bra004165.1-P	Field mustard	cytosol	37.28	41.18
Bra025439.1-P	Field mustard	cytosol	37.28	39.38
Bra016936.1-P	Field mustard	cytosol	23.08	37.14
Bra032785.1-P	Field mustard	cytosol	27.81	36.72
Bra039511.1-P	Field mustard	cytosol	37.28	34.62
Bra012497.1-P	Field mustard	cytosol	36.69	33.7
Bra010974.1-P	Field mustard	cytosol	37.28	33.69
Bra025924.1-P	Field mustard	cytosol	33.14	33.53
Bra016564.1-P	Field mustard	cytosol	34.32	33.33
Bra033745.1-P	Field mustard	cytosol	35.5	32.97
Bra015979.1-P	Field mustard	cytosol	30.77	32.7
Bra013470.1-P	Field mustard	cytosol	36.09	32.45
Bra020916.1-P	Field mustard	cytosol, plastid	34.32	31.52
Bra039845.1-P	Field mustard	plastid	33.14	29.63
Bra038801.1-P	Field mustard	cytosol	39.05	25.29
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	30.77	24.41
Bra029821.1-P	Field mustard	plastid	28.99	23.56

Protein Annotations

EnsemblPlants:Bra019554.1	EnsemblPlants:Bra019554.1-P	EnsemblPlantsGene:Bra019554	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF662	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000253EFF8	UniProt:M4F9F9	MapMan:35.1	:	:

Description

AT2G43290 (E=1e-080) MSS3 | MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding

Coordinates

chrA06:+:12243886..12244395

Molecular Weight (calculated)

18690.9 Da

IEP (calculated)

4.156

GRAVY (calculated)

-0.649

Length

169 amino acids

Sequence
(BLAST)

001: MLPSPSPSSA PSIKTDPTEL KRVFQTFDKN GDGRITKTEL NDSLENLGIY IPDKELTQMI HNIDANGDGC VDIDEFESLY SSIVDEHRKD GETEEEDMKD
101: AFNVFDQDGD GFITVEELKS VMGSLGLKQG KTLEGCKKMI MQVDGDGDGR VNYKEFLQMM KGGGFSCSN

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.