Factsheet for Bra039511.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
vacuole 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14927	Canola	cytosol	100.0	100.0
CDX96968	Canola	cytosol	98.35	92.75
AT5G44460.1	Thale cress	cytosol	87.36	87.85
Bra033745.1-P	Field mustard	cytosol	86.26	86.26
Bra013470.1-P	Field mustard	cytosol	67.58	65.43
Bra020916.1-P	Field mustard	cytosol, plastid	64.84	64.13
Solyc10g074740.1.1	Tomato	cytosol, plastid	63.19	57.79
PGSC0003DMT400071219	Potato	cytosol, plastid	63.19	57.79
VIT_08s0056g00290.t01	Wine grape	cytosol, mitochondrion	58.79	55.73
KRH40630	Soybean	mitochondrion	55.49	55.19
GSMUA_Achr8P01570_001	Banana	cytosol	56.04	55.14
Zm00001d047535_P001	Maize	plastid	53.3	51.87
Zm00001d029028_P001	Maize	plastid	53.3	51.6
Os03t0331700-02	Rice	plasma membrane	53.3	51.05
KXG39446	Sorghum	plastid	53.3	50.79
Bra038801.1-P	Field mustard	cytosol	71.43	49.81
EER92319	Sorghum	cytosol	51.1	49.47
TraesCS4D01G174400.1	Wheat	plastid	51.1	49.21
TraesCS4A01G132300.1	Wheat	plastid	51.1	48.69
TraesCS4B01G172400.1	Wheat	plastid	50.55	48.68
Os08t0144100-01	Rice	plasma membrane	52.2	48.47
HORVU4Hr1G050990.1	Barley	plastid	50.55	47.67
TraesCS2A01G103600.1	Wheat	plastid	50.0	47.64
TraesCS2B01G120900.1	Wheat	plastid	50.0	47.64
Zm00001d022430_P001	Maize	cytosol, plastid	52.2	47.5
Os07t0681400-01	Rice	cytosol	51.1	47.21
TraesCS7A01G306000.1	Wheat	plastid	50.55	46.94
TraesCS7D01G302700.1	Wheat	plastid	50.55	46.94
EER97743	Sorghum	plastid	51.1	46.73
TraesCS2D01G103400.1	Wheat	plastid	48.9	46.6
TraesCS7B01G206200.1	Wheat	plastid	50.55	46.46
HORVU7Hr1G072770.1	Barley	plastid	50.55	46.46
Zm00001d007181_P001	Maize	plastid	51.65	46.31
TraesCS5B01G342800.1	Wheat	cytosol	38.46	43.21
TraesCS5D01G348900.1	Wheat	cytosol	38.46	42.94
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	38.46	42.68
HORVU5Hr1G085800.2	Barley	cytosol	39.56	41.14
Bra000836.1-P	Field mustard	cytosol	33.52	39.61
Bra040379.1-P	Field mustard	cytosol	31.87	38.93
Os05t0312600-01	Rice	cytosol, plastid	41.76	38.58
Bra034870.1-P	Field mustard	cytosol	34.62	37.28
Bra019554.1-P	Field mustard	cytosol	34.62	37.28
Bra037722.1-P	Field mustard	cytosol	34.62	37.28
Bra001254.1-P	Field mustard	cytosol	31.32	37.25
Bra035972.1-P	Field mustard	cytosol	22.53	36.94
Bra034907.1-P	Field mustard	cytosol	30.77	36.84
Bra032677.1-P	Field mustard	cytosol	30.22	36.18
Bra025439.1-P	Field mustard	cytosol	29.67	33.75
Bra004165.1-P	Field mustard	cytosol	27.47	32.68
Bra032785.1-P	Field mustard	cytosol	22.53	32.03
Bra003376.1-P	Field mustard	vacuole	34.07	30.54
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	32.97	30.3
Bra010974.1-P	Field mustard	cytosol	30.22	29.41
Bra012497.1-P	Field mustard	cytosol	29.67	29.35
Bra015979.1-P	Field mustard	cytosol	25.27	28.93
Bra025924.1-P	Field mustard	cytosol	26.37	28.74
Bra016564.1-P	Field mustard	cytosol	26.92	28.16
Bra039845.1-P	Field mustard	plastid	29.12	28.04
Bra016936.1-P	Field mustard	cytosol	14.84	25.71
Bra029821.1-P	Field mustard	plastid	26.92	23.56
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	26.37	22.54

Protein Annotations

EnsemblPlants:Bra039511.1	EnsemblPlants:Bra039511.1-P	EnsemblPlantsGene:Bra039511	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR45003
PANTHER:PTHR45003:SF2	PFAM:PF13405	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000253E9A7	UniProt:M4FEJ0	MapMan:35.1	:

Description

AT5G44460 (E=2e-075) | calcium-binding protein, putative

Coordinates

chrScaffold000167:+:91516..92064

Molecular Weight (calculated)

20571.1 Da

IEP (calculated)

4.202

GRAVY (calculated)

-0.395

Length

182 amino acids

Sequence
(BLAST)

001: MEIISNEKNK LSRQSSSFRL RSPSLNTLRL HRIFDLFDKN NDGFITVEEL SQALSRLGLD ADICELKPTI ESFIKPDETG LRFDGFEALH KTLDESFFGG
101: DCECDGSPDS DLEEAFNVFD EDGDGFISPE ELQKVLKKLG LPEAVEIEHV EKMIVSVDSN HDGRVDFFEF KNMMQTVLVP SS

Best Arabidopsis Sequence Match ( AT5G44460.1 )
(BLAST)

001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S

Arabidopsis Description

CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.