Factsheet for Bra010974.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
vacuole 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36129	Canola	cytosol	100.0	100.0
Bra032785.1-P	Field mustard	cytosol	63.1	92.19
AT1G24620.1	Thale cress	cytosol	89.3	89.78
Bra012497.1-P	Field mustard	cytosol	85.56	86.96
CDY24421	Canola	endoplasmic reticulum, golgi	97.33	67.16
KRH75577	Soybean	cytosol	48.13	59.21
KRH37459	Soybean	cytosol	31.55	57.84
Solyc01g005370.2.1	Tomato	cytosol	51.87	56.4
PGSC0003DMT400025178	Potato	cytosol	51.87	55.75
KRH49632	Soybean	cytosol, mitochondrion, plastid	52.94	54.4
Solyc04g008000.2.1	Tomato	cytosol, plastid	55.08	53.93
KRH60410	Soybean	cytosol, plastid	53.48	53.19
PGSC0003DMT400075801	Potato	plastid	54.01	52.06
Bra040379.1-P	Field mustard	cytosol	34.22	42.95
Bra000836.1-P	Field mustard	cytosol	34.76	42.21
Bra034907.1-P	Field mustard	cytosol	33.69	41.45
Bra001254.1-P	Field mustard	cytosol	33.16	40.52
Bra016564.1-P	Field mustard	cytosol	37.43	40.23
Bra025439.1-P	Field mustard	cytosol	34.22	40.0
Bra004165.1-P	Field mustard	cytosol	32.62	39.87
Bra035972.1-P	Field mustard	cytosol	23.53	39.64
Bra015979.1-P	Field mustard	cytosol	33.69	39.62
Bra032677.1-P	Field mustard	cytosol	32.09	39.47
Os01t0949500-01	Rice	plasma membrane	39.04	39.46
Bra025924.1-P	Field mustard	cytosol	34.76	38.92
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	38.5	38.71
EES04217	Sorghum	cytosol, mitochondrion, plastid	39.04	38.62
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	38.5	38.1
TraesCS3B01G538300.1	Wheat	cytosol, plastid	38.5	37.89
TraesCS3B01G536200.1	Wheat	cytosol, plastid	38.5	37.89
TraesCS3D01G483200.1	Wheat	cytosol, plastid	38.5	37.7
TraesCS3A01G488400.1	Wheat	cytosol, plastid	38.5	37.7
Bra019554.1-P	Field mustard	cytosol	33.69	37.28
Bra037722.1-P	Field mustard	cytosol	33.69	37.28
Bra034870.1-P	Field mustard	cytosol	33.69	37.28
HORVU3Hr1G107090.2	Barley	cytosol, plastid	37.97	37.17
TraesCS1D01G239000.1	Wheat	mitochondrion	37.43	37.04
TraesCS1B01G250900.1	Wheat	mitochondrion	37.43	37.04
TraesCS1A01G238800.1	Wheat	mitochondrion	37.43	37.04
Zm00001d042107_P001	Maize	mitochondrion	37.97	36.6
HORVU1Hr1G057410.1	Barley	mitochondrion	36.9	36.51
Os05t0380900-01	Rice	cytosol, mitochondrion	37.43	34.83
Zm00001d038061_P001	Maize	mitochondrion	37.43	34.31
Bra016936.1-P	Field mustard	cytosol	19.25	34.29
EES19444	Sorghum	plastid	36.36	34.17
Bra033745.1-P	Field mustard	cytosol	30.48	31.32
Bra039511.1-P	Field mustard	cytosol	29.41	30.22
Bra020916.1-P	Field mustard	cytosol, plastid	29.41	29.89
Bra013470.1-P	Field mustard	cytosol	29.95	29.79
Bra039845.1-P	Field mustard	plastid	29.95	29.63
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	30.48	28.79
Bra003376.1-P	Field mustard	vacuole	31.02	28.57
Bra029821.1-P	Field mustard	plastid	28.88	25.96
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	27.27	23.94
Bra038801.1-P	Field mustard	cytosol	30.48	21.84

Protein Annotations

EnsemblPlants:Bra010974.1	EnsemblPlants:Bra010974.1-P	EnsemblPlantsGene:Bra010974	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF738	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0002545C59	UniProt:M4D3C0	MapMan:35.1	:	:

Description

AT1G24620 (E=3e-088) | polcalcin, putative / calcium-binding pollen allergen, putative

Coordinates

chrA08:-:17350561..17351124

Molecular Weight (calculated)

20346.8 Da

IEP (calculated)

4.481

GRAVY (calculated)

-0.611

Length

187 amino acids

Sequence
(BLAST)

001: MSNNKNQTNG SGGGSASRTG ADSPFLHKAR SGKTEIRELE AVFKKFDVNG DGKISSKELG AIMTSLGHEV PEEVLQKAIT DIDRKGDGYI NFEEFVELNT
101: KGMDQNEVLE NLKDAFSVYD IDGNGSISAE ELHEVLRSLG DECSIAECRK MIGGVDKDGD GTIDFEEFKI MMTLGSRRDN VMGGGQR

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.