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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001254.1-P Field mustard cytosol 100.0 100.0
CDX74043 Canola cytosol 99.35 99.35
AT3G07490.1 Thale cress cytosol 93.46 93.46
CDY60818 Canola cytosol 84.97 87.25
VIT_07s0141g00300.t01 Wine grape cytosol 83.66 83.12
VIT_07s0289g00040.t01 Wine grape cytosol 83.66 83.12
GSMUA_Achr8P28890_001 Banana cytosol 75.82 77.33
GSMUA_Achr2P05840_001 Banana cytosol 74.51 76.0
PGSC0003DMT400071189 Potato cytosol 73.86 75.84
GSMUA_Achr1P13420_001 Banana cytosol 73.86 75.33
Solyc06g083000.1.1 Tomato cytosol 73.2 75.17
KRG95097 Soybean cytosol 73.2 73.68
Solyc09g055880.1.1 Tomato cytosol 71.9 73.33
KRH66763 Soybean cytosol 72.55 73.03
GSMUA_Achr3P16870_001 Banana cytosol 71.24 72.19
CDX86544 Canola cytosol 71.24 72.19
CDY63788 Canola cytosol 71.24 72.19
CDY39714 Canola cytosol 71.24 71.71
CDY33702 Canola cytosol 70.59 71.05
GSMUA_Achr6P28770_001 Banana cytosol 67.97 69.33
CDX90890 Canola cytosol 67.32 66.88
CDY22119 Canola cytosol 66.01 66.45
CDY21953 Canola cytosol 65.36 65.79
Zm00001d023992_P001 Maize cytosol 67.32 64.78
OQU78964 Sorghum cytosol 67.97 63.03
CDY17950 Canola cytosol 64.71 59.64
TraesCS7A01G050500.1 Wheat cytosol 61.44 57.67
Os12t0228800-01 Rice cytosol 62.75 57.14
TraesCS7D01G045800.1 Wheat cytosol 61.44 54.34
CDY06002 Canola extracellular, vacuole 69.93 54.04
CDY72611 Canola extracellular, vacuole 69.93 53.5
CDX67796 Canola vacuole 69.93 52.71
CDX98375 Canola endoplasmic reticulum 69.93 52.45
TraesCS4A01G436700.1 Wheat cytosol 59.48 52.3
GSMUA_Achr9P07990_001 Banana endoplasmic reticulum, golgi, plastid 73.86 51.13
CDY30399 Canola extracellular 69.28 50.48
CDY23356 Canola vacuole 69.28 50.24
CDX83488 Canola extracellular 69.28 49.53
Os04t0492800-01 Rice cytosol, mitochondrion, nucleus, plastid 63.4 49.49
HORVU7Hr1G008910.2 Barley cytosol 65.36 46.73
TraesCS2B01G367500.1 Wheat plastid 62.09 44.39
TraesCS2A01G349100.1 Wheat plastid 61.44 43.72
TraesCS2D01G347500.1 Wheat plastid 62.09 43.18
CDY55679 Canola cytosol 39.22 39.22
CDX96150 Canola cytosol 39.22 39.22
Zm00001d003197_P001 Maize plastid 54.9 37.84
CDY44217 Canola endoplasmic reticulum, golgi 68.63 37.23
EES11048 Sorghum plastid 57.52 36.97
CDX99691 Canola cytosol 37.91 36.71
CDY27652 Canola cytosol 37.91 36.48
CDX96488 Canola cytosol 35.95 34.59
CDX72996 Canola cytosol 35.95 34.59
CDX94006 Canola cytosol 41.83 34.41
CDY36129 Canola cytosol 40.52 33.16
CDY70127 Canola cytosol 35.95 32.93
CDX94789 Canola cytosol 38.56 32.42
CDX84967 Canola cytosol 39.87 32.28
CDX96729 Canola cytosol 36.6 32.18
CDY40786 Canola cytosol 38.56 32.07
CDY03874 Canola cytosol 38.56 32.07
CDY27574 Canola cytosol 39.87 31.94
CDY49013 Canola cytosol 37.91 31.87
CDY19196 Canola cytosol 36.6 31.64
CDY31433 Canola cytosol, plastid 37.91 31.52
CDX76451 Canola cytosol, plastid 37.91 31.52
CDX79002 Canola cytosol 38.56 31.38
CDY14927 Canola cytosol 37.25 31.32
CDX83860 Canola cytosol 35.29 30.51
CDY37233 Canola plastid 37.25 30.16
CDY66855 Canola plastid 37.25 30.16
CDX82773 Canola cytosol 37.25 29.84
CDX96968 Canola cytosol 36.6 29.02
CDX98672 Canola cytosol 41.18 24.8
CDY23852 Canola cytosol, mitochondrion, plastid 32.68 23.47
CDX79938 Canola cytosol, mitochondrion, plastid 32.03 23.0
CDY24421 Canola endoplasmic reticulum, golgi 40.52 22.88
CDY06925 Canola cytosol, mitochondrion, plastid 31.37 22.12
CDY60169 Canola cytosol, plastid 29.41 21.63
CDY14768 Canola cytosol, mitochondrion, plastid 30.07 21.2
CDY00910 Canola cytosol, plastid 29.41 20.64
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1GO:A0A078F8B8UniProt:A0A078F8B8EnsemblPlants:CDY07993ProteinID:CDY07993
ProteinID:CDY07993.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509EnsemblPlantsGene:GSBRNA2T00125222001InterPro:IPR002048PFAM:PF13499PRINTS:PR01697ScanProsite:PS00018
PFscan:PS50222PANTHER:PTHR10891PANTHER:PTHR10891:SF546SMART:SM00054SUPFAM:SSF47473UniParc:UPI00025404C6
SEG:seg:::::
Description
BnaC03g35300DBnaC03g35300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8B8]
Coordinates
chrLK031982:-:470663..471124
Molecular Weight (calculated)
17388.6 Da
IEP (calculated)
4.041
GRAVY (calculated)
-0.592
Length
153 amino acids
Sequence
(BLAST)
001: MDQAELSRIF QMFDRNGDGK ITKQELNDSL ENVGIYMPDK DLVQMIEKID LNGDGYVDIE EFGGLYETIM EERDEEEDMR EAFNVFDQNR DGFITVEELK
101: SVLASLGLKQ GRTLEDCKKM IGKVDADGDG MVNYKEFKQM MKGGGFAALE SNL
Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)
001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
Arabidopsis Description
CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.