Factsheet for GSMUA_Achr8P28890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P16870_001	Banana	cytosol	86.0	85.43
GSMUA_Achr2P05840_001	Banana	cytosol	84.67	84.67
GSMUA_Achr6P28770_001	Banana	cytosol	84.0	84.0
GSMUA_Achr1P13420_001	Banana	cytosol	84.0	84.0
VIT_07s0141g00300.t01	Wine grape	cytosol	81.33	79.22
VIT_07s0289g00040.t01	Wine grape	cytosol	81.33	79.22
AT3G07490.1	Thale cress	cytosol	79.33	77.78
Bra040379.1-P	Field mustard	cytosol	75.33	75.84
CDY60818	Canola	cytosol	75.33	75.84
Bra001254.1-P	Field mustard	cytosol	77.33	75.82
CDY07993	Canola	cytosol	77.33	75.82
CDX74043	Canola	cytosol	76.67	75.16
Solyc06g083000.1.1	Tomato	cytosol	74.0	74.5
PGSC0003DMT400071189	Potato	cytosol	74.0	74.5
KRH66763	Soybean	cytosol	73.33	72.37
KRG95097	Soybean	cytosol	73.33	72.37
Solyc09g055880.1.1	Tomato	cytosol	71.33	71.33
Zm00001d023992_P001	Maize	cytosol	73.33	69.18
OQU78964	Sorghum	cytosol	72.67	66.06
TraesCS7A01G050500.1	Wheat	cytosol	67.33	61.96
Os12t0228800-01	Rice	cytosol	68.67	61.31
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	86.67	58.82
TraesCS7D01G045800.1	Wheat	cytosol	67.33	58.38
TraesCS4A01G436700.1	Wheat	cytosol	66.67	57.47
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	73.33	56.12
TraesCS2B01G367500.1	Wheat	plastid	71.33	50.0
HORVU7Hr1G008910.2	Barley	cytosol	70.67	49.53
TraesCS2A01G349100.1	Wheat	plastid	70.67	49.3
TraesCS2D01G347500.1	Wheat	plastid	71.33	48.64
Zm00001d003197_P001	Maize	plastid	64.0	43.24
EES11048	Sorghum	plastid	67.33	42.44
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	43.33	36.72
GSMUA_Achr8P01570_001	Banana	cytosol	44.0	35.68
GSMUA_Achr11P...	Banana	cytosol, plastid	40.67	35.47
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	50.67	35.02
GSMUA_Achr8P09680_001	Banana	plastid	40.0	29.7
GSMUA_Achr6P09820_001	Banana	cytosol	44.0	25.29
GSMUA_Achr9P27060_001	Banana	plastid	29.33	22.34
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	42.67	22.22

Protein Annotations

EnsemblPlants:GSMUA_Achr8P28890_001	EnsemblPlants:GSMUA_Achr8T28890_001	EnsemblPlantsGene:GSMUA_Achr8G28890_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI00029671DF	UniProt:M0TUJ2	MapMan:35.1	:	:

Description

Calmodulin-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr8G28890_001]

Coordinates

chr8:+:31521190..31521642

Molecular Weight (calculated)

16769.7 Da

IEP (calculated)

4.071

GRAVY (calculated)

-0.472

Length

150 amino acids

Sequence
(BLAST)

001: MDPSELKRVF QMFDRNGDGR ITKAELTDSL ENLGILVPEA ELASMIERID ANGDGCVDVE EFGTLYRTIM DERDEEEDMR EAFNVFDRNG DGFITVEELR
101: SVLASLGLKQ GRTAEDCRKM INEVDVDGDG VVNFKEFKQM MKGGGFAAPS

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.