Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G125800.1 | Wheat | cytosol | 98.84 | 98.84 |
| TraesCS1B01G148000.1 | Wheat | cytosol | 97.67 | 97.67 |
| Os05t0223000-01 | Rice | plasma membrane | 81.98 | 74.6 |
| EES19251 | Sorghum | cytosol | 77.33 | 74.3 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 93.6 | 70.61 |
| GSMUA_Achr8P17950_001 | Banana | cytosol, plastid | 58.14 | 56.5 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 47.09 | 52.6 |
| PGSC0003DMT400074098 | Potato | cytosol | 46.51 | 51.95 |
| PGSC0003DMT400014742 | Potato | cytosol | 48.84 | 51.22 |
| KRH24162 | Soybean | cytosol | 41.28 | 50.71 |
| Solyc03g118810.1.1 | Tomato | cytosol | 47.67 | 50.0 |
| KRH48613 | Soybean | cytosol | 51.74 | 49.72 |
| CDY70127 | Canola | cytosol | 45.93 | 47.31 |
| Bra025924.1-P | Field mustard | cytosol | 45.35 | 46.71 |
| AT1G18210.1 | Thale cress | cytosol | 45.93 | 46.47 |
| KRH02767 | Soybean | cytosol | 40.7 | 46.05 |
| CDX96488 | Canola | cytosol | 42.44 | 45.91 |
| CDX72996 | Canola | cytosol | 42.44 | 45.91 |
| Bra015979.1-P | Field mustard | cytosol | 42.44 | 45.91 |
| KRH15405 | Soybean | cytosol | 38.37 | 45.83 |
| KRH41828 | Soybean | cytosol | 47.67 | 45.56 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 45.35 | 45.35 |
| KRH16247 | Soybean | cytosol | 34.3 | 45.04 |
| AT1G73630.1 | Thale cress | cytosol | 42.44 | 44.79 |
| CDY19196 | Canola | cytosol | 45.93 | 44.63 |
| Bra016564.1-P | Field mustard | cytosol | 44.19 | 43.68 |
| CDX96729 | Canola | cytosol | 43.6 | 43.1 |
| CDX83860 | Canola | cytosol | 44.19 | 42.94 |
| TraesCS3A01G038300.1 | Wheat | cytosol | 45.35 | 41.94 |
| GSMUA_Achr6P09820_001 | Banana | cytosol | 59.88 | 39.46 |
| TraesCS1A01G238800.1 | Wheat | mitochondrion | 42.44 | 38.62 |
| TraesCS3A01G488400.1 | Wheat | cytosol, plastid | 40.7 | 36.65 |
| KRH60530 | Soybean | plastid | 45.93 | 36.57 |
| TraesCS7A01G050500.1 | Wheat | cytosol | 31.98 | 33.74 |
| TraesCS4A01G436700.1 | Wheat | cytosol | 30.81 | 30.46 |
| TraesCS2A01G103600.1 | Wheat | plastid | 32.56 | 29.32 |
| TraesCS2A01G349100.1 | Wheat | plastid | 35.47 | 28.37 |
| TraesCS7A01G306000.1 | Wheat | plastid | 31.98 | 28.06 |
| TraesCS5A01G343000.1 | Wheat | cytosol, mitochondrion | 26.74 | 28.05 |
| TraesCS4A01G132300.1 | Wheat | plastid | 30.23 | 27.23 |
| TraesCS5A01G238900.1 | Wheat | mitochondrion | 27.91 | 26.23 |
| TraesCS3A01G488700.1 | Wheat | nucleus, plastid | 27.33 | 24.48 |
| TraesCS7A01G133200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 39.53 | 20.12 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G134000.1 | EnsemblPlantsGene:TraesCS1A01G134000 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | ncoils:Coil | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF698 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 |
| SUPFAM:SSF47473 | TIGR:cd00051 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:193517450..193517968
Molecular Weight (calculated)
18341.6 Da
IEP (calculated)
4.480
GRAVY (calculated)
-0.382
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MANGVGSAKA EICAGLGMPM AELEQVFRRY DANGDGKISA DELASVLRAL GAPPGPGEVQ SMMEEMDADR DGFVDLHEFA AFHCGPCKGS AAADAKEQEA
101: ATEAELKEAF RMYDADRNGL ISARELHRVL RQLGEKCSVA DCSRMIRSVD ADGDGSVNFE EFKKMMGGGG RS
101: ATEAELKEAF RMYDADRNGL ISARELHRVL RQLGEKCSVA DCSRMIRSVD ADGDGSVNFE EFKKMMGGGG RS
001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
Arabidopsis Description
CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.