Factsheet for TraesCS7A01G133200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G132700.1	Wheat	endoplasmic reticulum	63.91	93.51
TraesCS7B01G034000.1	Wheat	endoplasmic reticulum	63.31	91.45
HORVU7Hr1G027770.3	Barley	endoplasmic reticulum	57.99	85.59
Os06t0172200-02	Rice	plasma membrane	51.48	73.73
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	50.3	69.96
EER87935	Sorghum	endoplasmic reticulum, vacuole	48.82	67.35
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	31.36	48.85
TraesCS7A01G050500.1	Wheat	cytosol	22.49	46.63
TraesCS4A01G436700.1	Wheat	cytosol	22.19	43.1
PGSC0003DMT400086334	Potato	cytosol	22.49	42.94
KRH20147	Soybean	extracellular	26.92	39.74
TraesCS1A01G134000.1	Wheat	cytosol	20.12	39.53
TraesCS2A01G349100.1	Wheat	plastid	25.15	39.53
Solyc07g007950.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	25.74	39.19
KRH03663	Soybean	endoplasmic reticulum, extracellular	26.33	38.86
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	18.34	37.8
VIT_11s0016g05740.t01	Wine grape	extracellular, golgi	28.4	37.5
PGSC0003DMT400079359	Potato	extracellular, golgi	25.74	37.18
TraesCS3A01G488400.1	Wheat	cytosol, plastid	19.82	35.08
TraesCS4A01G132300.1	Wheat	plastid	19.23	34.03
TraesCS1A01G238800.1	Wheat	mitochondrion	18.64	33.33
TraesCS2A01G103600.1	Wheat	plastid	17.75	31.41
TraesCS3A01G038300.1	Wheat	cytosol	16.86	30.65
TraesCS7A01G306000.1	Wheat	plastid	17.16	29.59
TraesCS3A01G488700.1	Wheat	nucleus, plastid	16.27	28.65
TraesCS5A01G238900.1	Wheat	mitochondrion	14.79	27.32

Protein Annotations

EnsemblPlants:TraesCS7A01G133200.1	EnsemblPlantsGene:TraesCS7A01G133200	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF703
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	TIGR:cd00051	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:85437099..85438115

Molecular Weight (calculated)

36690.6 Da

IEP (calculated)

6.195

GRAVY (calculated)

-0.410

Length

338 amino acids

Sequence
(BLAST)

001: MNGDAGVNLP MHRHNHPRST TRSHDRAATE PTNQPTACLF HPTTLLLLHL YSLRRRLFRR RRLRLIYYPL RAVCPHIHTH SPADKPTLAL PPPTAGQHCG
101: SAKSQRPSMA PLLLLFLLGG LCALFSLASS SSRGAKKCCD ADGEKAKSHN RGEQGEKASG KVEERAAPAD READLGIVFS TFDHDGDGFI TAGELEESLK
201: RLGIAVSAAE AAAMVARVDA NSDGLIDIHE FRELYDSIPK KRKASLLPPS AGAEAGAEEE EEDEEGEEMD LKEAFDVFDG NKDGLISAEE LGTVLGSLGL
301: RGRPAAAECR DMIRLVDSDG DGMVNFEEFK RMMAVVKA

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.