Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 90.6 | 95.5 |
| PGSC0003DMT400086334 | Potato | cytosol | 54.27 | 71.75 |
| PGSC0003DMT400071189 | Potato | cytosol | 33.76 | 53.02 |
| PGSC0003DMT400018016 | Potato | cytosol | 33.33 | 52.0 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 55.13 | 50.39 |
| KRH03663 | Soybean | endoplasmic reticulum, extracellular | 46.15 | 47.16 |
| KRH20147 | Soybean | extracellular | 45.73 | 46.72 |
| PGSC0003DMT400026987 | Potato | cytosol | 26.5 | 42.76 |
| PGSC0003DMT400025178 | Potato | cytosol | 30.77 | 41.38 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 38.46 | 41.1 |
| PGSC0003DMT400074098 | Potato | cytosol | 25.21 | 38.31 |
| TraesCS7D01G132700.1 | Wheat | endoplasmic reticulum | 37.18 | 37.66 |
| PGSC0003DMT400075801 | Potato | plastid | 31.2 | 37.63 |
| GSMUA_Achr6P35120_001 | Banana | endoplasmic reticulum | 34.62 | 37.33 |
| TraesCS7B01G034000.1 | Wheat | endoplasmic reticulum | 37.18 | 37.18 |
| PGSC0003DMT400078654 | Potato | cytosol | 24.36 | 36.54 |
| Os06t0172200-02 | Rice | plasma membrane | 35.04 | 34.75 |
| PGSC0003DMT400014742 | Potato | cytosol | 23.93 | 34.15 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 32.91 | 33.62 |
| Zm00001d037477_P001 | Maize | endoplasmic reticulum, vacuole | 34.19 | 32.92 |
| EER87935 | Sorghum | endoplasmic reticulum, vacuole | 34.19 | 32.65 |
| PGSC0003DMT400071219 | Potato | cytosol, plastid | 26.07 | 30.65 |
| PGSC0003DMT400089961 | Potato | cytosol | 22.65 | 30.64 |
| PGSC0003DMT400066610 | Potato | plastid | 23.5 | 29.73 |
| PGSC0003DMT400033250 | Potato | cytosol | 23.93 | 29.17 |
| TraesCS7A01G133200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 37.18 | 25.74 |
| PGSC0003DMT400076709 | Potato | mitochondrion | 23.08 | 25.59 |
| PGSC0003DMT400021079 | Potato | cytosol, mitochondrion, plastid | 21.79 | 24.88 |
| PGSC0003DMT400027581 | Potato | cytosol, plastid | 21.37 | 23.15 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:102585648 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | UniProt:M1D1P4 | PFAM:PF13499 |
| EnsemblPlantsGene:PGSC0003DMG400030892 | PGSC:PGSC0003DMG400030892 | EnsemblPlants:PGSC0003DMT400079359 | PRINTS:PR01697 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF703 | SMART:SM00054 | SUPFAM:SSF47473 | TMHMM:TMhelix | UniParc:UPI0002955C0E |
| RefSeq:XP_006358302.1 | SEG:seg | : | : | : | : |
Description
Calmodulin [Source:PGSC_GENE;Acc:PGSC0003DMG400030892]
Coordinates
chr7:+:4159695..4161285
Molecular Weight (calculated)
26509.9 Da
IEP (calculated)
4.297
GRAVY (calculated)
-0.214
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTISLLFLA FLFILGLITT LFNFPTKKFQ SWIFSLSVKP QTLTPTTPFV NKDSILVEKK SSKLELRGIF ATFDKNNDGY ITKQELKQSL KNIGIFMEDG
101: DILEMVEKVD SNKDGLIDID EFYELCHSFL GIEKVVSEEE GGVEKGEEEE GDLKDAFDVF DYDKDGLISE EELSKVLSSL GLNQGKRLDD CKEMIRNVDV
201: DGDGMVNFDE FKKMMKNGGR LIPILRGNSI MLQD
101: DILEMVEKVD SNKDGLIDID EFYELCHSFL GIEKVVSEEE GGVEKGEEEE GDLKDAFDVF DYDKDGLISE EELSKVLSSL GLNQGKRLDD CKEMIRNVDV
201: DGDGMVNFDE FKKMMKNGGR LIPILRGNSI MLQD
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.