CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73006	Soybean	cytosol	94.33	94.33
KRH30955	Soybean	cytosol	77.31	79.56
KRG97926	Soybean	cytosol	75.89	76.98
Solyc02g063350.1.1	Tomato	cytosol	65.96	64.14
PGSC0003DMT400026987	Potato	cytosol	65.96	64.14
VIT_14s0006g01400.t01	Wine grape	cytosol	65.25	61.33
PGSC0003DMT400078654	Potato	cytosol	67.38	60.9
Solyc02g091500.1.1	Tomato	cytosol	65.25	58.97
Bra004165.1-P	Field mustard	cytosol	53.9	49.67
CDX96150	Canola	cytosol	53.9	49.67
CDY27652	Canola	cytosol	55.32	49.06
CDY55679	Canola	cytosol	53.19	49.02
Bra025439.1-P	Field mustard	cytosol	55.32	48.75
CDX99691	Canola	cytosol	54.61	48.73
AT1G66400.1	Thale cress	cytosol	53.19	47.77
KRH24162	Soybean	cytosol	46.81	47.14
AT5G37770.1	Thale cress	cytosol	53.19	46.58
KRH75577	Soybean	cytosol	48.23	44.74
KRH48613	Soybean	cytosol	56.03	44.13
KRH15405	Soybean	cytosol	44.68	43.75
KRH02767	Soybean	cytosol	46.81	43.42
KRH41828	Soybean	cytosol	53.9	42.22
KRH37459	Soybean	cytosol	29.08	40.2
KRH16247	Soybean	cytosol	36.88	39.69
KRH29625	Soybean	cytosol	29.79	39.62
KRH60410	Soybean	cytosol, plastid	52.48	39.36
KRH66763	Soybean	cytosol	41.13	38.16
KRG95097	Soybean	cytosol	40.43	37.5
KRH49632	Soybean	cytosol, mitochondrion, plastid	46.1	35.71
KRH71148	Soybean	cytosol	43.26	32.97
KRH50269	Soybean	mitochondrion	43.26	32.97
KRH60530	Soybean	plastid	50.35	32.87
KRH65252	Soybean	plastid	48.94	32.24
KRH76288	Soybean	plastid	48.94	32.24
KRH28478	Soybean	cytosol, plastid	41.84	31.55
KRH00581	Soybean	plastid	49.65	31.39
KRH23209	Soybean	cytosol, mitochondrion	40.43	30.98
KRH76994	Soybean	cytosol, plastid	40.43	30.48
KRH57807	Soybean	plastid	39.72	29.63
KRH04628	Soybean	plastid	39.72	29.47
KRH10131	Soybean	endoplasmic reticulum	43.26	28.91
KRH40630	Soybean	mitochondrion	36.88	28.42
KRH24625	Soybean	cytosol	43.26	27.6
KRH20147	Soybean	extracellular	41.84	25.76
KRH03663	Soybean	endoplasmic reticulum, extracellular	41.13	25.33
KRG95139	Soybean	plastid	34.75	22.48
KRH66816	Soybean	plastid	33.33	21.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100806182	MapMan:35.1	EMBL:ACUP02009083	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_14G215800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1MBX1
InterPro:IPR002048	EnsemblPlants:KRH17370	ProteinID:KRH17370	ProteinID:KRH17370.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF698	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000233B862

Description

hypothetical protein

Coordinates

chr14:-:48030837..48031262

Molecular Weight (calculated)

15893.6 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.777

Length

141 amino acids

Sequence
(BLAST)

001: MDDEVQQIFN KFDKNGDGKI SMAELKDMLS ALGSKTTDEE LKRMIEELDQ NGDGFIDLKE FADFHCNGGA GKDDSKELRD AFDLYDVDKN GLISAKELHH
101: VLRNLGEKCS LSDCRRMISN VDGDGDGNVN FEEFKKMMTR S

Best Arabidopsis Sequence Match ( AT1G66400.1 )
(BLAST)

001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA

Arabidopsis Description

CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.