Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026987 | Potato | cytosol | 65.33 | 67.59 |
| Solyc02g063350.1.1 | Tomato | cytosol | 65.33 | 67.59 |
| KRH73006 | Soybean | cytosol | 62.67 | 66.67 |
| KRH17370 | Soybean | cytosol | 61.33 | 65.25 |
| KRH30955 | Soybean | cytosol | 58.67 | 64.23 |
| Solyc02g091500.1.1 | Tomato | cytosol | 66.67 | 64.1 |
| PGSC0003DMT400078654 | Potato | cytosol | 66.0 | 63.46 |
| KRG97926 | Soybean | cytosol | 58.67 | 63.31 |
| Bra004165.1-P | Field mustard | cytosol | 56.0 | 54.9 |
| CDX96150 | Canola | cytosol | 56.0 | 54.9 |
| CDY55679 | Canola | cytosol | 55.33 | 54.25 |
| AT1G66400.1 | Thale cress | cytosol | 53.33 | 50.96 |
| CDY27652 | Canola | cytosol | 53.33 | 50.31 |
| Bra025439.1-P | Field mustard | cytosol | 53.33 | 50.0 |
| CDX99691 | Canola | cytosol | 52.67 | 50.0 |
| AT5G37770.1 | Thale cress | cytosol | 52.67 | 49.07 |
| VIT_07s0141g00300.t01 | Wine grape | cytosol | 36.67 | 35.71 |
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 36.67 | 35.71 |
| VIT_15s0048g00790.t01 | Wine grape | mitochondrion | 46.0 | 33.82 |
| VIT_03s0063g00530.t01 | Wine grape | cytosol | 40.0 | 32.97 |
| VIT_08s0007g05790.t01 | Wine grape | mitochondrion, plastid | 42.0 | 28.38 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 34.0 | 26.56 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 37.33 | 26.17 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 42.0 | 24.61 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100253496 | wikigene:100253496 | MapMan:35.1 | UniProt:A5BZ57 | EMBL:AM476491 |
| ProteinID:CAN68471 | ProteinID:CAN68471.1 | ProteinID:CCB57648 | ProteinID:CCB57648.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EMBL:FN596245 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 |
| EntrezGene:LOC100253496 | wikigene:LOC100253496 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF698 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:TC63220 | UniParc:UPI0001522416 | ArrayExpress:VIT_14s0006g01400 |
| EnsemblPlantsGene:VIT_14s0006g01400 | EnsemblPlants:VIT_14s0006g01400.t01 | unigene:Vvi.15428 | RefSeq:XP_002274476 | RefSeq:XP_002274476.1 | : |
Description
No Description!
Coordinates
chr14:-:17312601..17313438
Molecular Weight (calculated)
16546.3 Da
IEP (calculated)
4.264
GRAVY (calculated)
-0.515
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNSCGSLG TMEEVERVFN RFDKNGDGKI SAEEFGEVLQ ALGSTTSPDE LTRIMSEIDT DGDGFIDLKE FADFHRATDS NGGLTELRDA FDMYDRDKNG
101: LISASELHAV FKSLGEKVTL KDCSRMISSV DADGDGCVNF EEFKKMMTRS
101: LISASELHAV FKSLGEKVTL KDCSRMISSV DADGDGCVNF EEFKKMMTRS
001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
Arabidopsis Description
CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.