Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 4
- nucleus 1
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_12s0028g02240.t01 | |
| VIT_18s0001g09830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G41410.1 | VIT_12s0028g02240.t01 | AT2G42580.1 | 19000166 |
| AT2G41410.1 | VIT_18s0001g09830.t01 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076709 | Potato | mitochondrion | 59.91 | 63.03 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 57.21 | 61.95 |
| PGSC0003DMT400021079 | Potato | cytosol, mitochondrion, plastid | 56.76 | 61.46 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 55.86 | 58.22 |
| PGSC0003DMT400027581 | Potato | cytosol, plastid | 55.86 | 57.41 |
| Bra004620.1-P | Field mustard | cytosol, mitochondrion, plastid | 54.5 | 56.81 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 54.5 | 56.81 |
| Bra016936.1-P | Field mustard | cytosol | 26.58 | 56.19 |
| KRG95139 | Soybean | plastid | 54.95 | 55.96 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 53.15 | 54.63 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 52.25 | 53.46 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 51.35 | 52.53 |
| KRH66816 | Soybean | plastid | 51.8 | 52.51 |
| Bra029821.1-P | Field mustard | plastid | 48.65 | 51.92 |
| CDY60169 | Canola | cytosol, plastid | 48.65 | 51.92 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 48.65 | 51.67 |
| Solyc04g018110.1.1 | Tomato | plastid | 55.86 | 51.24 |
| TraesCS5B01G134200.1 | Wheat | cytosol | 20.72 | 51.11 |
| CDY00910 | Canola | cytosol, plastid | 50.0 | 50.92 |
| GSMUA_Achr8P09680_001 | Banana | plastid | 39.64 | 43.56 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 28.38 | 42.0 |
| TraesCS5D01G141900.1 | Wheat | plastid | 32.88 | 39.89 |
| HORVU5Hr1G043460.1 | Barley | plastid | 32.43 | 39.34 |
| TraesCS3A01G488700.1 | Wheat | nucleus, plastid | 33.78 | 39.06 |
| EES02048 | Sorghum | plastid | 33.33 | 38.74 |
| Zm00001d004972_P001 | Maize | plastid | 32.43 | 38.5 |
| TraesCS3D01G484600.1 | Wheat | cytosol, plastid | 33.78 | 38.46 |
| TraesCS3B01G536600.1 | Wheat | nucleus, plastid | 33.33 | 37.56 |
| Zm00001d042108_P001 | Maize | cytosol, plastid | 32.43 | 37.5 |
| EES16521 | Sorghum | plastid | 36.04 | 37.38 |
| Os11t0141400-01 | Rice | cytosol | 31.53 | 37.23 |
| Os01t0949300-01 | Rice | plasma membrane | 33.78 | 36.76 |
| KXG27695 | Sorghum | plastid | 32.43 | 36.55 |
| VIT_07s0141g00300.t01 | Wine grape | cytosol | 24.32 | 35.06 |
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 24.32 | 35.06 |
| GSMUA_Achr8P00110_001 | Banana | endoplasmic reticulum, golgi | 45.05 | 34.72 |
| VIT_03s0063g00530.t01 | Wine grape | cytosol | 27.48 | 33.52 |
| VIT_15s0048g00790.t01 | Wine grape | mitochondrion | 29.28 | 31.86 |
| Os12t0138050-00 | Rice | plastid | 32.88 | 30.67 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 33.33 | 27.41 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 25.68 | 26.64 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 27.03 | 23.44 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 19.37 | 22.4 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100264151 | wikigene:100264151 | MapMan:35.1 | ProteinID:CCB55296 | ProteinID:CCB55296.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | UniProt:F6HLP0 | EMBL:FN595991 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | EntrezGene:LOC100264151 | wikigene:LOC100264151 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF739 | SMART:SM00054 | SUPFAM:SSF47473 |
| TIGR:TC52664 | TIGR:TC61983 | UniParc:UPI00015CAED5 | ArrayExpress:VIT_08s0007g05790 | EnsemblPlantsGene:VIT_08s0007g05790 | EnsemblPlants:VIT_08s0007g05790.t01 |
| unigene:Vvi.1111 | RefSeq:XP_002276334 | RefSeq:XP_002276334.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:-:19704984..19705934
Molecular Weight (calculated)
24282.3 Da
IEP (calculated)
4.251
GRAVY (calculated)
-0.434
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLIYKINPK QLFRSKKSRS VTRTDPSSFS SGTSSSTSSD SSTNLKTGTG ACGGGMGTPT SVLPMHSYEI SGDWSDFSSD IQTELVHAFK MIDRDGDGKI
101: TKRELEALLS RVGVEPPSEE EIMMMLSEVD RDGDGCISLE EFGAISSAFG PACDTELRDA FCFFDTDRDG KITAEELNQV FAAIGDDRCT LEDCQRMIAG
201: VDKNGDGFVC FEDFSRMMEQ QT
101: TKRELEALLS RVGVEPPSEE EIMMMLSEVD RDGDGCISLE EFGAISSAFG PACDTELRDA FCFFDTDRDG KITAEELNQV FAAIGDDRCT LEDCQRMIAG
201: VDKNGDGFVC FEDFSRMMEQ QT
001: MKLAASLNRL SPKRLFRTKS KASVSRSEPS SFSSNASSSS SDGSYGNLKQ GPTATPISVL PQNSGDFYTE LVQAFKLIDR DDDGVVSRGD LAALISRLSH
101: EPPSQEEVSL MLREVDGGDG GCISLEDLAS RVAGTSGEGS VETEELREVF EIFDVDRNGK ISAEELHRVF GVIGDERCTL EECMRMIATV DGNGDGFVCF
201: DDFCRMMVPA MNDHHH
101: EPPSQEEVSL MLREVDGGDG GCISLEDLAS RVAGTSGEGS VETEELREVF EIFDVDRNGK ISAEELHRVF GVIGDERCTL EECMRMIATV DGNGDGFVCF
201: DDFCRMMVPA MNDHHH
Arabidopsis Description
CML35Probable calcium-binding protein CML35 [Source:UniProtKB/Swiss-Prot;Acc:P30188]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.