CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50269	Soybean	mitochondrion	90.81	90.81
VIT_03s0063g00530.t01	Wine grape	cytosol	64.86	65.93
CDY66855	Canola	plastid	61.08	59.79
Bra039845.1-P	Field mustard	plastid	60.0	58.73
CDY37233	Canola	plastid	60.0	58.73
Solyc01g108190.2.1	Tomato	plastid	57.84	57.84
AT2G15680.1	Thale cress	plastid	58.38	57.75
PGSC0003DMT400066610	Potato	plastid	55.14	55.14
HORVU5Hr1G068490.1	Barley	cytosol	22.7	48.84
KRH76994	Soybean	cytosol, plastid	45.41	44.92
KRH28478	Soybean	cytosol, plastid	45.41	44.92
KRH57807	Soybean	plastid	44.86	43.92
KRH17370	Soybean	cytosol	32.97	43.26
KRH30955	Soybean	cytosol	31.89	43.07
EER96860	Sorghum	cytosol, mitochondrion	42.7	42.93
KRH04628	Soybean	plastid	43.78	42.63
KRH73006	Soybean	cytosol	32.43	42.55
KRG97926	Soybean	cytosol	31.89	42.45
GSMUA_Achr9P27060_001	Banana	plastid	43.78	41.12
Os09t0458700-01	Rice	cytosol, mitochondrion	40.54	40.54
TraesCS5B01G237500.1	Wheat	mitochondrion	38.92	39.34
TraesCS5D01G246000.1	Wheat	mitochondrion	38.38	38.8
TraesCS5A01G238900.1	Wheat	mitochondrion	38.38	38.8
Zm00001d020722_P001	Maize	cytosol, mitochondrion	38.38	38.59
KRG95097	Soybean	cytosol	29.73	36.18
KRH75577	Soybean	cytosol	29.73	36.18
KRH66763	Soybean	cytosol	29.19	35.53
KRH60410	Soybean	cytosol, plastid	34.59	34.04
KRH49632	Soybean	cytosol, mitochondrion, plastid	32.97	33.52
KRH29625	Soybean	cytosol	18.92	33.02
KRH24162	Soybean	cytosol	23.24	30.71
KRH37459	Soybean	cytosol	16.76	30.39
KRH41828	Soybean	cytosol	28.65	29.44
KRH48613	Soybean	cytosol	28.11	29.05
KRH16247	Soybean	cytosol	20.54	29.01
KRH76288	Soybean	plastid	32.43	28.04
KRH40630	Soybean	mitochondrion	27.57	27.87
KRH02767	Soybean	cytosol	22.7	27.63
KRH00581	Soybean	plastid	32.97	27.35
KRH65252	Soybean	plastid	31.35	27.1
KRH03663	Soybean	endoplasmic reticulum, extracellular	33.51	27.07
KRH23209	Soybean	cytosol, mitochondrion	26.49	26.63
KRH10131	Soybean	endoplasmic reticulum	30.27	26.54
KRH15405	Soybean	cytosol	20.54	26.39
KRH20147	Soybean	extracellular	32.43	26.2
KRH60530	Soybean	plastid	28.11	24.07
KRH24625	Soybean	cytosol	28.11	23.53
KRG95139	Soybean	plastid	27.03	22.94
KRH66816	Soybean	plastid	25.41	21.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100499763	MapMan:35.1	EMBL:ACUP02000872	EMBL:BT089463	UniProt:C6SWC0
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_02G133000	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KRH71148	ProteinID:KRH71148	ProteinID:KRH71148.1	PFAM:PF13499
PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF620	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0001B14E24	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:13760608..13761881

Molecular Weight (calculated)

21123.2 Da

IEP (calculated)

7.514

GRAVY (calculated)

-0.735

Length

185 amino acids

Sequence
(BLAST)

001: MSNTSLLDFQ YSLSRKKYLR KPSRLFSWDR QNSGPKNVFP QPKADEMKQV FDKFDSNKDG KISQQEYKAT MKALGMGDSV HEVPNIFRVV DLNGDGFINF
101: KEFMEAQSKG GGVRMMDIQS AFRTFDKNGD GRISAEEVKE MLGKLGERCS IEDSRRMVRA VDTDGDGMVD MDEFTTMMTQ SLRHV

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.